| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0271 |
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| Symbol | |
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| ID | 7172153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 309580 |
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| End bp | 310533 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538767 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_002434696 |
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| Protein GI | 218885375 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.113366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT CGATCGGTCT CGGCAAGGAG GGCGTGGAGG AAAGGCTTGC GGAACGCGGC
GTGTCTCGAC GCGACTTCCT CAAGTTCTGT ACGGCCATCG CCGTGACCAT GGGCATGGGC
CCCGCGTTCG CGCCGGAAGT TGCCCGCGCG CTCATGGGTC CCCGGCGCCC GTCCGTGGTC
TACCTGCACA ACGCCGAATG CACCGGCTGT TCCGAATCGG TGCTGCGCGC GTTCGAACCC
TACATCGACA CCCTGATTCT GGACACGCTG TCCCTCGACT ACCATGAGAC CATCATGGCC
GCCGCGGGCG ATGCGGCGGA AGCCGCCCTG GAGCAGGCCG TCAACAGCCC GCACGGCTTC
ATCGCCGTGG TGGAAGGCGG CATTCCCACG GCTGCCAACG GCATCTACGG CAAGGTGGCC
AACCACACCA TGCTGGACAT CTGCAGCCGC ATCCTGCCCA AGGCCCAGGC CGTCATCGCG
TACGGCACCT GCGCCACCTT CGGCGGCGTG CAGGCAGCCA AGCCCAACCC CACCGGTGCC
AAGGGCGTCA ACGACGCGCT GAAGCACCTT GGCGTCAAGG CCATCAACAT CGCCGGTTGC
CCGCCGAACC CGTACAACCT GGTCGGCACC ATCGTGTACT ACCTGAAGAA CAAGGCCGCG
CCCGAGCTGG ACAGCCTGAA CCGGCCCACC ATGTTCTTCG GCCAGACCGT GCACGAACAG
TGCCCCCGCC TACCGCACTT CGACGCGGGC GAATTCGCCC CGTCGTTCGA ATCGGAAGAA
GCCCGCAAGG GCTGGTGCCT CTACGAGCTG GGCTGCAAGG GCCCGGTGAC CATGAACAAC
TGCCCGAAGA TCAAGTTCAA CCAGACCAAC TGGCCCGTGG ACGCGGGGCA CCCCTGCATC
GGGTGCAGCG AACCCGATTT CTGGGACGCC ATGACCCCGT TCTACCAGAA CTGA
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| Protein sequence | MKISIGLGKE GVEERLAERG VSRRDFLKFC TAIAVTMGMG PAFAPEVARA LMGPRRPSVV
YLHNAECTGC SESVLRAFEP YIDTLILDTL SLDYHETIMA AAGDAAEAAL EQAVNSPHGF
IAVVEGGIPT AANGIYGKVA NHTMLDICSR ILPKAQAVIA YGTCATFGGV QAAKPNPTGA
KGVNDALKHL GVKAINIAGC PPNPYNLVGT IVYYLKNKAA PELDSLNRPT MFFGQTVHEQ
CPRLPHFDAG EFAPSFESEE ARKGWCLYEL GCKGPVTMNN CPKIKFNQTN WPVDAGHPCI
GCSEPDFWDA MTPFYQN
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