| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0270 |
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| Symbol | |
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| ID | 7172152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 307818 |
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| End bp | 309521 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538766 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002434695 |
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| Protein GI | 218885374 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.11146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT GCAGAGCCCA GAATGCTCCG GGCGGCATCC CCGTGACGCC CAAGAGCTCC
TATAGCGGTC CCATCGTCGT CGACCCCGTT ACCCGCATCG AAGGCCACCT GCGCATCGAG
GTGGAAGTGG AGAACGGCAA GGTCAAGAAC GCCTACAGCA GTTCCACGCT GTTCCGGGGC
CTTGAAATCA TCCTGAAGGG CCGCGACCCC CGCGACGCCC AGCACTTCAC CCAGCGCACC
TGCGGCGTGT GCACCTATAC CCATGCGCTG GCCTCCACCC GCTGCGTGGA CAACGCCGTG
GGCGTGCACA TTCCCAAGAA CGCCACCTAC ATCCGCAACC TGGTGCTGGG CGCGCAGTAC
CTGCACGACC ACATCGTGCA CTTCTACCAC CTGCACGCCC TGGACTTCGT GGACGTGACC
GCCGCGCTGA AGGCCGACCC GGCCAAGGCC GCCAAGGTGG CCTCGTCCAT CTCGCCCCGC
AAGACCACGG CGGCGGACCT GAAGGCGGTG CAGGACAAGC TGAAGACCTT CGTGGAAAGC
GGGCAGCTCG GCCCGTTCAC CAATGCCTAC TTCCTGGGCG GCCACCCCGC CTACTACCTG
GATCCGGAAA CCAACCTCAT CGCCACCGCC CACTACCTGG AAGCCCTGCG CCTTCAGGTG
AAGGCCGCGC GCGCCATGGC CGTTTTCGGC GCCAAGAACC CGCACACCCA GTTCACCGTG
GTGGGCGGCG TGACCTGCTA CGACGCCCTG ACCCCGCAGC GCATCGCCGA ATTCGAGGCG
CTGTGGAAGG AAACCAAGGC GTTCGTTGAT GAAGTGTACA TCCCCGACCT GCTGGTGGTT
GCCGCGGCCT ACAAGGATTG GACGCAGTAC GGCGGCACCG ACAACTTCAT CACCTTCGGC
GAATTCCCGA AGGACGAGTA CGACCTGAAC AGCCGGTTCT TCAAGCCGGG CGTGGTCTTC
AAGCGCGACT TCAAGAACAT CAAGCCGTTC GACAAGATGC AGATCGAAGA ACACGTGCGC
CACAGCTGGT ACGAAGGCGC GGAAGCCCGC CACCCGTGGA AGGGCCAGAC CCAGCCCAAG
TACACCGACC TGCACGGCGA CGACCGCTAC TCGTGGATGA AGGCCCCCCG CTACATGGGC
GAGCCCATGG AAACGGGGCC GCTGGCCCAG GTGCTGATCG CCTACTCGCA GGGCCACCCC
AAGGTGAAGG CCGTGACCGA CGCAGTGCTT GCCAAGCTGG GCGTGGGCCC CGAGGCCCTG
TTCTCCACCC TGGGCCGCAC GGCGGCGCGC GGCATCGAAA CCGCCGTCAT CGCAGAATAC
GTGGGAGTGA TGCTGCAGGA GTACAAGGAC AACATCGCCA AGGGCGACAA CGTCATCTGC
GCCCCGTGGG AAATGCCCAA GCAGGCGGAA GGCGTGGGCT TCGTCAACGC CCCGCGCGGC
GGCCTGTCGC ACTGGATCCG CATCGAGGAC GGCAAGATCG GCAACTTCCA ACTGGTCGTG
CCCTCCACCT GGACCCTTGG CCCCCGCTGC GACAAGAACA AGCTGTCGCC GGTGGAAGCC
TCGCTCATCG GCACCCCGGT GGCCGATGCC AAGCGCCCGG TGGAAATCCT GCGCACGGTG
CATTCGTTCG ACCCGTGCAT CGCCTGCGGC GTGCACGTCA TCGACGGGCA CACCAACGAA
GTGCACAAGT TCCGCATCCT GTAA
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| Protein sequence | MSGCRAQNAP GGIPVTPKSS YSGPIVVDPV TRIEGHLRIE VEVENGKVKN AYSSSTLFRG
LEIILKGRDP RDAQHFTQRT CGVCTYTHAL ASTRCVDNAV GVHIPKNATY IRNLVLGAQY
LHDHIVHFYH LHALDFVDVT AALKADPAKA AKVASSISPR KTTAADLKAV QDKLKTFVES
GQLGPFTNAY FLGGHPAYYL DPETNLIATA HYLEALRLQV KAARAMAVFG AKNPHTQFTV
VGGVTCYDAL TPQRIAEFEA LWKETKAFVD EVYIPDLLVV AAAYKDWTQY GGTDNFITFG
EFPKDEYDLN SRFFKPGVVF KRDFKNIKPF DKMQIEEHVR HSWYEGAEAR HPWKGQTQPK
YTDLHGDDRY SWMKAPRYMG EPMETGPLAQ VLIAYSQGHP KVKAVTDAVL AKLGVGPEAL
FSTLGRTAAR GIETAVIAEY VGVMLQEYKD NIAKGDNVIC APWEMPKQAE GVGFVNAPRG
GLSHWIRIED GKIGNFQLVV PSTWTLGPRC DKNKLSPVEA SLIGTPVADA KRPVEILRTV
HSFDPCIACG VHVIDGHTNE VHKFRIL
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