Gene DvMF_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0255 
Symbol 
ID7172135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp290904 
End bp291458 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID643538750 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_002434680 
Protein GI218885359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.00570383 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACTGC TGCTGCAACG GGCGCGCCGG GGATCGGTGG CGGTAAACGG TGAAATCGTG 
GCCGCCATCG GGCCGGGGCT GGTGGTGCTG GCGGGCTTTG GCCCGCGCGA TACCGCCGCG 
CTGCCCGGTG AGCCGCGCTG GGCGGGCATG ATCGACAAGA TGCTGGACCT GCGCGTGTTT 
CCCGACGACG CGGGAAAGAT GAACGTGGGT CTGCGCGAAT GGCCCGTACC CGCCAGCATG 
CAGGACGCCA TGGTCGGGGG CATCGCTTCC GGCGGCATGT TGGGCCAGCT GCTGCTGGTG 
CCCCAGTTCA CCCTGCACGC CGACTGCCGC AAGGGCCGCC GCCCGTCGTT TTCCTCCGCC 
GCGCAGCCCG CCGTGGCCGA AGGCCTGTTC GGCCAACTGG CTACCGATAT TGACGCACGC 
CTGCCGGGGC GGGTACGCTG TGGTATCTTC GCGGCCGACA TGGACGTCTC CCTCGTCAAC 
TGGGGGCCGG TGACCATCTG GCTGAGCGAC GACGACCTCT TTCCGGAGCG GCGACAACCC 
AATGGCGGCG GATGA
 
Protein sequence
MRLLLQRARR GSVAVNGEIV AAIGPGLVVL AGFGPRDTAA LPGEPRWAGM IDKMLDLRVF 
PDDAGKMNVG LREWPVPASM QDAMVGGIAS GGMLGQLLLV PQFTLHADCR KGRRPSFSSA 
AQPAVAEGLF GQLATDIDAR LPGRVRCGIF AADMDVSLVN WGPVTIWLSD DDLFPERRQP 
NGGG