| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0249 |
|---|
| Symbol | |
|---|
| ID | 7172129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 283640 |
|---|
| End bp | 285205 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643538744 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_002434674 |
|---|
| Protein GI | 218885353 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.0328352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CCCCCACGCC CCCGGCACCC GCCACCGCGC CCGCTTCCGT CAACGCACCC
ACGGACGGGG CGGCAGATGC GCCCATTCTG GTGTTGCAGA TGCAGCGCAT GGGCGATCTG
GTGCTGACGT TTCCGCTGCT GGCGTGGCTG CGGGCGGAAC ACCCGCGCCG TCCGCTGTGG
GTGGTGGGAG AGGAAAAATT CTTCAAGGGG CTCATGCCCA TCGGGCCGGA GGCGGTGTTC
TTTCCGTACG GCGCGGCGGA ACGGCTGCGC CGGAATCGCT ACCATCTTGT GGTCAACCTC
AGCCACCGGC CAGAGGCCGC CGCACTGGCC GGGCAACTGC ATGCCGATGC GCATTTCGGT
CCATATCTTG CCGGTGGGGA CACCGGGAAA GGCACTGGCC AGACCACCTA CGTGCACGGG
CGCTGGCAGT TGTACCGGAC CTCGCTGGTG CACAACAACC GGCACAACCT GTTCCACTGG
GCCGACCTGA ACGCGCTGGA CTGCGTGCCT CACAGCCGCA TACGGGGCAC CGACTGGCCC
GCCCCGCAAC ATCAAGGGCG CGACCCGCAA CGGGTGGGAC TGTTCCTGGG GGCCAGCGAG
CCGGAAAAAC GCCCCGGCGC CCCGTTCTGG GCCGCGCTGG CCCGCGACCT GCTGCGGCGC
GGGCTGAAGC CCGTCCTGCT GGGTGGTCCG GCAGAGGCGG CGCTGGGGGC CGACGTGGCC
CGCCGCGCCA ATACCCCGGC CCTGAACCTG TGCGGGCGCT TCACCCTGCC GGAACTGGTG
GCCTTCACCC GTTCGCTGCG CCTGCTGGTC ACGCCGGATA CCGGCCCCAT GCACGTGGCC
GCCTGGACCC AGACCCCCAC CCTGAACCTG TCCATGGGAC CGGTGAACGC CTGGGAAACC
GCCCCCTTTC CCCCCGGACA TCACGTGCTG CGCGCCACCA TCAGCTGCGT GGGCTGCTGG
CGGTGCACCC AGCCTTCCGT GCTGTGCCGC GACAGGTTCG ACCCCGCTCG GGTGGCATCG
CTGGTGCACG CGCTGCTGCG CGAACAGGAT GCTGCCCCCA CCCTGGCAGC CAGTGGCGCG
AAAGCCGCCA CCGCAGCCTC GCGCCTTGCC CGGCTGCGCC TGCCGGGGCT GGAACTGCTG
CGCACCGGGC GCGACGCGCT GGGCCTGTTC GACCTCGTTC CCATGGGCCA CAACGGCAAC
GGAGAACAGG CAGTGCCCCG CCGCCTGTTC GGCCAGTTCT GGAAGGCATT CTGGTCCTGG
CGGCTCGGCC TGCACGGCGA GGCCGCCGCC CGCCGGGCCT GGGCCGACCT TGCCGCCGCC
TCGCCCCATC TGGCCGAGGC CCTGCGCCGT GCCCTGTCGG GCCTTGGGCG CGACCTGGCC
CATGCCCTGC GCGGCATGGG GTCCGGACAG GCCATGCTGC CGCCCGACTT CTGGCACCGC
CACCCGCCCA TGCTGCGCCC CCTCACCGGC TACCTGCACA TGTCGGTGCA GAACGCCGAC
GCCACCGCCA CCGCCTGGGC CGAGGCCCTG GCCCTGGTGG AAGCCCTGGC CGCCCTTACG
GCCTGA
|
|---|
| Protein sequence | MTTAPTPPAP ATAPASVNAP TDGAADAPIL VLQMQRMGDL VLTFPLLAWL RAEHPRRPLW
VVGEEKFFKG LMPIGPEAVF FPYGAAERLR RNRYHLVVNL SHRPEAAALA GQLHADAHFG
PYLAGGDTGK GTGQTTYVHG RWQLYRTSLV HNNRHNLFHW ADLNALDCVP HSRIRGTDWP
APQHQGRDPQ RVGLFLGASE PEKRPGAPFW AALARDLLRR GLKPVLLGGP AEAALGADVA
RRANTPALNL CGRFTLPELV AFTRSLRLLV TPDTGPMHVA AWTQTPTLNL SMGPVNAWET
APFPPGHHVL RATISCVGCW RCTQPSVLCR DRFDPARVAS LVHALLREQD AAPTLAASGA
KAATAASRLA RLRLPGLELL RTGRDALGLF DLVPMGHNGN GEQAVPRRLF GQFWKAFWSW
RLGLHGEAAA RRAWADLAAA SPHLAEALRR ALSGLGRDLA HALRGMGSGQ AMLPPDFWHR
HPPMLRPLTG YLHMSVQNAD ATATAWAEAL ALVEALAALT A
|
|---|
| |