| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0248 |
|---|
| Symbol | |
|---|
| ID | 7172128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 281211 |
|---|
| End bp | 283106 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643538743 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_002434673 |
|---|
| Protein GI | 218885352 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0205536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTT TTCCCTTTCT CCCCGAGACC GCAAAGGCAC CGTCCGATGT GACGCGGCGC
CCCAAGGTCA CTGCCAGCAC CCTCGACTTT GCTTCCGTGC TCGCGGACAA GGCGAGCCCG
CGTTCCCTTT CGGGCGCGGG CACCACCGCC ATCCGCACCG CCGCCAATGC GGCCACGGAA
GCCAAGGGCA AGGTGCGCAG GGGCGAGGAC GGCGGCGTGC TCACCGCGCC CGGGCAGATC
AGCCTTTCCT ATCAGGACGT CATTGCGCTG CGGAACCAGC TGGAAAAGAG CGGCGTTTCG
CCCGACCGGC TGGAACGCCT CACCCAGATG GCTTCCACCC CCGGCAACTA TTCGCTGGGC
CAGGTCATTT CGGCCCTGCG CAAGGACGGC CCCTACGCCA ACCTGAACGC CGACGGCACC
GCCACCACCG CCCTGAACGG CAACCAGCGC CTGGACGCCA AGCAGTTCCT GCAAAAGATC
GGCATGCTGC CCGAAGAAGC GGACGGCATG CTGGCCCAGA TGGACGCGGG CAACACCGAC
ACGGTGTGGA AGGCCGTCAG CAGCAAGCTG AGCAGCAAGA CCGACGGCGA CGCCATCGAC
GTCAACGTGG CGGAACTGGA GGCCATGGCC AAGGGCCTGC GCCTGTCGCC CGAAGTGCTG
GCCGCCATGA AGACGCTGTT CGGCGGACAG ACCGAAATTT CCACCAACGC CGCCGGGCTG
AAGTCCGCAC TGGTGCCCGC CGGGCAGGAA ATGGCCGCGC GCGAGCAGGC CGACCGCAAC
CTGGCCTCGG CCCTTGGCTC CGCGCTCGAC CCGGTGTTGC AGGCGGCCAA GAAGTCCGCC
GAGCGCATTG AGCAGGCCGA CCGGCGCGGT GACCGCGCCG CCCAGCGCAG CGAGGTGCTG
ATCCGCGAAG CCGCCACCGG CAAGGGCAAC GGCAGCGGCG TTGCCCCCGC GCTGGACGCC
GAACGCCACG ACGGAGCATC GACCAATGCG GGCAAGACCC GCCAGTCGGG CCTGATGCAC
ACCGGGGCTG GCACCCAGGA GCATGCTGGT CGCCAGGCTG GCCAGACGGG CGACGCCCTC
CAGCAGAACG CGTCCCCGCA CAATGGCAAG GGGGGCGCCA ACGGCCAGCA GGCACAGACG
GCGCAGGGCA ATGCCCAGGC ACAGGCCTTC GGTCTGGACA AACAGTCCGG CCAGTCTTCG
CAGTCGGGCG AGGGCAAGGG TTCGGCCTGG CAGCAGGACC AGCACGGTCG GCCCGCTTCC
GGCGGCAGCA GCGACCCGTG GGCCGAACTG CTGCGCAAGA TCGACATCAG CCCGGCTCTC
AGCGGCGCGG CCCAGAGCAT GGCCGACGCT TCGGCCAGCG CCGCCAACGC GGCGGGTGCA
GCCCAGCGAC AGGGCCAGGC CCTGACTCCC TATCTTTCCG AACAGGCGGC GGCCCAGCTT
GAGCGGGGCA TCCTCACCTC CATGCAGGAC GGCACCCGCC AGCTGACCAT GAAGCTCGAC
CCCGGCGAAC TGGGCAACGT GACCGTGACC CTTTCCGTGC GCAACGGAGA GGTCAACGCC
ACCATCCGCC CCGACCGCAC AGAGACCGCG CAGGCCATCA ACGACCAGCT GCACGTGCTG
CGCACCGCGC TGGAACAGCA GGGGCTGAAG GTGGACCGGC TGGAAGTGCA GACCCAGTTG
CAGGACAACT CGTTCTCGCA GGCCTGGCAG GATGCGGCCC AGCACAACGC CAGCCAGGAG
CAGCAGACCC GCAACGCCGA GCGCGAGCGC TACCGTCGCC TGCGCCGCCT GCGCGACGGG
GACGACGCCT CCGGCGCGCA GTCCGTGGAC ATGGCCGCTG CCGCTGCGGG GCGCCCGGCA
ACTCTTACCG CCTCCGGGCT CGACATCATC GCATAG
|
|---|
| Protein sequence | MHIFPFLPET AKAPSDVTRR PKVTASTLDF ASVLADKASP RSLSGAGTTA IRTAANAATE
AKGKVRRGED GGVLTAPGQI SLSYQDVIAL RNQLEKSGVS PDRLERLTQM ASTPGNYSLG
QVISALRKDG PYANLNADGT ATTALNGNQR LDAKQFLQKI GMLPEEADGM LAQMDAGNTD
TVWKAVSSKL SSKTDGDAID VNVAELEAMA KGLRLSPEVL AAMKTLFGGQ TEISTNAAGL
KSALVPAGQE MAAREQADRN LASALGSALD PVLQAAKKSA ERIEQADRRG DRAAQRSEVL
IREAATGKGN GSGVAPALDA ERHDGASTNA GKTRQSGLMH TGAGTQEHAG RQAGQTGDAL
QQNASPHNGK GGANGQQAQT AQGNAQAQAF GLDKQSGQSS QSGEGKGSAW QQDQHGRPAS
GGSSDPWAEL LRKIDISPAL SGAAQSMADA SASAANAAGA AQRQGQALTP YLSEQAAAQL
ERGILTSMQD GTRQLTMKLD PGELGNVTVT LSVRNGEVNA TIRPDRTETA QAINDQLHVL
RTALEQQGLK VDRLEVQTQL QDNSFSQAWQ DAAQHNASQE QQTRNAERER YRRLRRLRDG
DDASGAQSVD MAAAAAGRPA TLTASGLDII A
|
|---|
| |