Gene DvMF_0243 details

Gene Information

• Locus tag: DvMF_0243
• Symbol: rnc
• ID: 7172123
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 275595
• End bp: 276287
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643538738
• Product: ribonuclease III
• Protein accession: YP_002434668
• Protein GI: 218885347
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 65
• Fosmid unclonability p-value: 0.0530001
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTCGAAA AGCTGCAAAG CGACATTCAT TACGCCTTCA ACGACGCGGG CCTGCTGGCC 
ACGGCCATGA CCCACAGTTC GTGGGCCAAC GAGCAGCAGG AGCACGTGGA GCACAACGAA 
CGCCTGGAAT TCCTGGGCGA TGCCGTGCTT GAGCTGTGCG TGTCGGAAGA ACTGTTCGCC 
CGCTTTCCCG GCGCCCGCGA GGGCGACCTG ACCCGCATGC GGGCGCGCCT TGTCAGCAAA 
CCGGCGCTGG CCGAGCTTGC GCGCGACCTG CAACTGGAAC TGTACCTGCG GCTTGGCAGG 
GGCGAGGAAA GCCAGGGAGG GCGTGAACGC AGTTCCCTGC TGTCGGACGC GCTGGAAGCC 
ATGCTGGGGG CGGTGTTTCT GGACGGAGGG TACGAGCGGG CGCGGGCCGT GGTGCGCCAT 
GTGCTGGCCG CGCGCTGGCC CTGCGATGCC GATGGCAAGC GCAGCAAGGA CTACAAGAGC 
CGTTTGCAGG AGCTGACGCA AAGCCTGTTC CGTGAGCGGC CGGTATACGC CCTGATGGGC 
AGCAGCGGGC CGGAGCACGA AAAGCGCTTC GAGGTGCGGC TGACGCTGCC GGACGGCACC 
GTGTTCACGG CCATCGGCCC CAGCGTCAAA AGGGCCGAAC AGATGGCGGC CGGTCTGGCG 
CTGAAAAACC TCGAGTCACG AAGCGACGGC TGA 

 

Protein sequence

MFEKLQSDIH YAFNDAGLLA TAMTHSSWAN EQQEHVEHNE RLEFLGDAVL ELCVSEELFA 
RFPGAREGDL TRMRARLVSK PALAELARDL QLELYLRLGR GEESQGGRER SSLLSDALEA 
MLGAVFLDGG YERARAVVRH VLAARWPCDA DGKRSKDYKS RLQELTQSLF RERPVYALMG 
SSGPEHEKRF EVRLTLPDGT VFTAIGPSVK RAEQMAAGLA LKNLESRSDG