Gene DvMF_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0235 
Symbol 
ID7172115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp262238 
End bp262888 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID643538730 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002434660 
Protein GI218885339 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.0472066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG CGACCCTGGC CGCCATGAGC ACCTATGCCA TCGCCATGAG CGTCACCCCC 
GGCCCCAACA ACACCATGGT CATGTCGTCG GGCCTCACCT TCGGCTTCTG GCGCACCATG
CCCCACCTGA TGGGCATCTC GCTGGGCTTT CCGCTGATGA TCATTTCCGT GGGCCTCGGC
ATGGACCGGA TTTTCGCCGC CGTGCCGCAA CTGCACGACT GGCTGCGCTG GGTGGGGTCC
GCCTATCTGC TGTGGCTGTC GTGGCGCATC GCCACCGCCG CGCCGCCCAC GCCGGGCGAG
GCCGCGAAAG GCCGCAACGC CGCGCGCCCC ATGACCTTCA TCGAAGGGGC GCTGTTCCAG
TGGGTGAACC CCAAGGCGTG GCTGGCCGCC GTGGCCGGGG TGACCACTTA CGTTTCCGGG
CATGGCGGGT CGGAATCGCC CCTTGCCGCC AACGTGCTTG GCCTGCACGG CGTATCCCCT
GAACTGCTGG CGCTTACGGC AGTGTTCGCG GTGATGGCCT TCCCGTCCGT GGCCATCTGG
TGCGCGGGCG GCACGGCCCT GCGCGGGCTG CTGCATTCCC CCGTGGCGGT GCGCTGGTGC
AACGTGGTGA TGGGCGCGCT GCTGGCCATT TCGGTATTTT CCTTGTTCTA A
 
Protein sequence
MEFATLAAMS TYAIAMSVTP GPNNTMVMSS GLTFGFWRTM PHLMGISLGF PLMIISVGLG 
MDRIFAAVPQ LHDWLRWVGS AYLLWLSWRI ATAAPPTPGE AAKGRNAARP MTFIEGALFQ
WVNPKAWLAA VAGVTTYVSG HGGSESPLAA NVLGLHGVSP ELLALTAVFA VMAFPSVAIW
CAGGTALRGL LHSPVAVRWC NVVMGALLAI SVFSLF