Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0235 |
Symbol | |
ID | 7172115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 262238 |
End bp | 262888 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643538730 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002434660 |
Protein GI | 218885339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.0472066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCG CGACCCTGGC CGCCATGAGC ACCTATGCCA TCGCCATGAG CGTCACCCCC GGCCCCAACA ACACCATGGT CATGTCGTCG GGCCTCACCT TCGGCTTCTG GCGCACCATG CCCCACCTGA TGGGCATCTC GCTGGGCTTT CCGCTGATGA TCATTTCCGT GGGCCTCGGC ATGGACCGGA TTTTCGCCGC CGTGCCGCAA CTGCACGACT GGCTGCGCTG GGTGGGGTCC GCCTATCTGC TGTGGCTGTC GTGGCGCATC GCCACCGCCG CGCCGCCCAC GCCGGGCGAG GCCGCGAAAG GCCGCAACGC CGCGCGCCCC ATGACCTTCA TCGAAGGGGC GCTGTTCCAG TGGGTGAACC CCAAGGCGTG GCTGGCCGCC GTGGCCGGGG TGACCACTTA CGTTTCCGGG CATGGCGGGT CGGAATCGCC CCTTGCCGCC AACGTGCTTG GCCTGCACGG CGTATCCCCT GAACTGCTGG CGCTTACGGC AGTGTTCGCG GTGATGGCCT TCCCGTCCGT GGCCATCTGG TGCGCGGGCG GCACGGCCCT GCGCGGGCTG CTGCATTCCC CCGTGGCGGT GCGCTGGTGC AACGTGGTGA TGGGCGCGCT GCTGGCCATT TCGGTATTTT CCTTGTTCTA A
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Protein sequence | MEFATLAAMS TYAIAMSVTP GPNNTMVMSS GLTFGFWRTM PHLMGISLGF PLMIISVGLG MDRIFAAVPQ LHDWLRWVGS AYLLWLSWRI ATAAPPTPGE AAKGRNAARP MTFIEGALFQ WVNPKAWLAA VAGVTTYVSG HGGSESPLAA NVLGLHGVSP ELLALTAVFA VMAFPSVAIW CAGGTALRGL LHSPVAVRWC NVVMGALLAI SVFSLF
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