Gene DvMF_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0213 
Symbol 
ID7172093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp239751 
End bp241919 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content69% 
IMG OID643538711 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002434641 
Protein GI218885320 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.100019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAG CCGACAAGAA CACCGAGCGC AGTACCCTGA TCATCGCGGT GATGGCGCTG 
GTGACCATCG GTCTTTCGCT CATCGTCTCC ACCGGGCAGA CCCTGAACCG GCAGGAAGAG
GCGGGCACCC AGCACCTCAT CCTTACCGCC CGGTCGGTGT TGCAGGCGGT GGAAACATCG
CTGCGGCGCG GGCTGTTCAT GCGGCCCAAC GGACCCGGCC TGTTCAGCCC CGGCACGGCG
GAACTGTTCC GCGAACTGGA GCAGAGCGGC GACGTGCTGT TCGTGGGCAT CATCGACCGG
CAGGGGGGGC GGGTGCTCAC CTCGCGCCCA ACGCAAGAGG CGGGCGGCAC GCTGGTCTTT
CCGCCCGAAG CCTTGCAGGA CCTGGCCCAG AAGGGCGAAT GGCACGGCCG CGCCACGTTC
GGCAAGCTCA GCGCCTACGT GTACGGCAAG CGCATCCTGC CCCGCAGCCA CACCCTGATG
CACGACACGG ATCTCGACGA CACCGGGCAG GTCCGTCCCG AAGCCGGGGC CGACGGGGGG
CAGGCGCATG GCCCCGGTCC GTCAGGTCCG TCAGGTCCGT CAGGTCCGTC AGGTTCATCC
GGCCCGCCCG GTTCCTTCGG TCAGGGCGAC TTTGCCTCCG ACGACCCCAA CCAGTTGCCC
ACCTTCCTGG TGGTGGGGCT GGACATGGCC AAGCACCTTG CGGTGTACCG GGGCTTTCGC
CAGAACGCGC TGTTTCAGGC GGCGTACATC CTGGCGGCGG CAGTGTTCAT CTGGGTGCTG
ACCATGAGTT TCCTGAAGCG CCGCGAGCAG GCGGGCCGAG CAGCCGTGCT GGAACGGTTT
CAGGCCCGGC TGGTGGACAA CCTGCCCGAC GGCCTGCTGA CCATCACCCA GGACAACGTG
GTGCGCGCTG CAAATCCTGC GGCCCACGAC ATCATGAAGG CCCGCGACGG CAGCCTTGCG
GGCATGGACG TGGCCGATCT GCCGCCGGAA GTCGCCGGGT GCATCGCCGG GCCGGACAGC
GGCGCCACCC CCGGCTGGGC CAACCGCACC GTGGATGGCG CGCATCTGGA AATCCTTACC
CTGCCCATCC GCGAAAGCGA CGAGGAACAC GACCGCCTCG TCATCATCCG CGACCGCACC
CAGATCCGCG AACTGGAAAA GAGCCTGAGC GAGGCGGAAA AGCTGGCCGC CGTGGGTACC
CTGGCCGCCG GGGTGGCGCA CGAGATACGC AACCCGCTCT CTGCGTTGCG CGGTTTTGCC
CAGTATTTCG CCAAGAAGCT GGCGGGCAAG CAGCCGGACG AGAATTACGC CCAGACCATG
GTGCGCGAGG CGGACAGGCT GAACCGGGTC ATCACCGACC TGTTGTACCT GGCCAGACCG
CGCGCCATCG AACCGCGCGA GGTCAGCCTG GGGCAACTGG CGGCGGAACT GGAAAGCCTG
GTGCGCTTCG ACGCGGGCAA GCTGGGGGTG CACATGCGCA CCAGCCTGGG GCCCGACCTG
GTCATGGCCG ACGAAGACGC GCTGAAGCAG GCCCTGCTGA ACCTGGTCCT GAACAGCCTG
GACGCGCTGG CGCAGTGCCC GCAGCCCGCT GCGGGGGTGG GGCGCGAGAT TCACATCTCG
TCCATGGCCT CCGACGGCGG GGTGTGGGTG TTCGTGCGCG ACACCGGGCC GGGCATGAGC
CGCGAGCAGC GCGAGCAGGC CTTTGAGCCG TTCTACACCA CCAAGAAGAA GGGCACCGGC
CTTGGCCTTG CCCTGGTGCA CAAGACCATG CGCGACCATG GTGGCCGCGC GCAGATAGAT
TCCGAGGTGG GGCGCGGCAC CACGGTGGCG CTGTTCTTTC CGGGGGCGGG GCACGCCGCG
CGAACCGGCC AGGCCGAGAG GGCGGGGGGA ATGAACGTGC CGGAGGGCGG CGACCCGCTG
GACCATGGCG CGGACATGCC GACGGGCAAT TGCCCCGGTG CGGCGGCCTT CGACATGGCC
ACGGCCAATC GCGAGGGCAG GGGCGAGGGG CACGGCGGCA TCGCGCCGGG TGGCGACGCC
GGGAACGCCA CCGGCCATGA ACGTGCCGCT GCCGGGCATG GCGCCCCCGG ACATGCTGCT
TCCGGCCACT CCACGACAGA CCCGTCCGCC ACTGATACGG TCATCGACAT AACCGAGGAC
AAACGATGA
 
Protein sequence
MDIADKNTER STLIIAVMAL VTIGLSLIVS TGQTLNRQEE AGTQHLILTA RSVLQAVETS 
LRRGLFMRPN GPGLFSPGTA ELFRELEQSG DVLFVGIIDR QGGRVLTSRP TQEAGGTLVF
PPEALQDLAQ KGEWHGRATF GKLSAYVYGK RILPRSHTLM HDTDLDDTGQ VRPEAGADGG
QAHGPGPSGP SGPSGPSGSS GPPGSFGQGD FASDDPNQLP TFLVVGLDMA KHLAVYRGFR
QNALFQAAYI LAAAVFIWVL TMSFLKRREQ AGRAAVLERF QARLVDNLPD GLLTITQDNV
VRAANPAAHD IMKARDGSLA GMDVADLPPE VAGCIAGPDS GATPGWANRT VDGAHLEILT
LPIRESDEEH DRLVIIRDRT QIRELEKSLS EAEKLAAVGT LAAGVAHEIR NPLSALRGFA
QYFAKKLAGK QPDENYAQTM VREADRLNRV ITDLLYLARP RAIEPREVSL GQLAAELESL
VRFDAGKLGV HMRTSLGPDL VMADEDALKQ ALLNLVLNSL DALAQCPQPA AGVGREIHIS
SMASDGGVWV FVRDTGPGMS REQREQAFEP FYTTKKKGTG LGLALVHKTM RDHGGRAQID
SEVGRGTTVA LFFPGAGHAA RTGQAERAGG MNVPEGGDPL DHGADMPTGN CPGAAAFDMA
TANREGRGEG HGGIAPGGDA GNATGHERAA AGHGAPGHAA SGHSTTDPSA TDTVIDITED
KR