Gene DvMF_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0209 
Symbol 
ID7172089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp229450 
End bp230418 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID643538707 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_002434637 
Protein GI218885316 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.0222681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG TCGTACTGGA CGGCTACACC CTGAACCCCG GCGACAACCC GTGGGATGCC 
GTTGCCGCGC TTGGCGAACT GACCGTGCAC GACCGCACCC CGCGCGAGGC CATACGCGAA
CGTGCGGCGG GCGCGCACAT GGTGCTGACC AACAAGACCC CGCTGGATGC CGACACCATA
GCGGCACTGC CCGACCTTGC CTACATCGGG GTGCTGGCCA CGGGGTACGA CGTGGTGGAC
ATCCGCGCCG CCGCCGCGCG CTCCATCCCG GTATGCAACG TGCCCGGGTA CGGCACCGAG
GCCGTGGCCC AGCACGTCTT CGCCTTTCTG CTGGAGCTGT GCCGCCGCAT CGCCCGGCAC
GACGCCAGCG TGAAGGTGGG CAACTGGAGC GCCAACAAGG ACTGGTGCTT CTGGGAAACC
ACCCAGATTG AGCTGACCGG CAAGGCCATG GGCATCGTGG GCTTCGGCAA CATGGGCAAG
CGCGTGGGGC AGATCGCCAA CGCCTTCGGC ATGAAGGTGC TGGCCTACTC GCCCAACACC
CGCACCATGC CGGGGTACGA GCCCTTCGCC TACGTTTCGC TGGACGAACT GTTCGCCCGC
TCCGACGTGG TCACCCTGCA CTGCCCGCTC ACCGACGCCA CGCGCGGCAT GGTCAACCGG
GTGCGTCTGG CCTCCATGAA GCAGGGCGCC ATCCTCATCA ACACCGCACG CGGCCCCCTG
CTGGACGAGG CCGCCGTGGC CGCCGCCCTC AACGACAACC ACCTGGGCGG CCTTGGCGTG
GACGTGGTGG CGGTGGAGCC CATCCGACCG GACAACCCGT TGCTGACGGC CAAGAACTGC
CTGATCACCC CCCATCTGGC CTGGGCCACC CTGACCGCGC GGCAGACCCT GATGCGCGTC
ACGGCGGGCA ACATCCGCGC CTTCCTGGCC GGTGCGCCCA CCAACGTGGT GAAAGCGCCC
ACGGTGTAA
 
Protein sequence
MRIVVLDGYT LNPGDNPWDA VAALGELTVH DRTPREAIRE RAAGAHMVLT NKTPLDADTI 
AALPDLAYIG VLATGYDVVD IRAAAARSIP VCNVPGYGTE AVAQHVFAFL LELCRRIARH
DASVKVGNWS ANKDWCFWET TQIELTGKAM GIVGFGNMGK RVGQIANAFG MKVLAYSPNT
RTMPGYEPFA YVSLDELFAR SDVVTLHCPL TDATRGMVNR VRLASMKQGA ILINTARGPL
LDEAAVAAAL NDNHLGGLGV DVVAVEPIRP DNPLLTAKNC LITPHLAWAT LTARQTLMRV
TAGNIRAFLA GAPTNVVKAP TV