| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0208 |
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| Symbol | |
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| ID | 7172088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 227131 |
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| End bp | 229419 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643538706 |
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| Product | EAL domain protein |
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| Protein accession | YP_002434636 |
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| Protein GI | 218885315 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.043954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG GCTCCGCCGA AGAAACCGTT GCGCCGTCCA CGGGCGGAGA GCGGATCATG
GGGGACGCGG TCGCCGACAA CGCGGCCAAC CGCGCCGCGC CGTGGTGGCG ACCGCTGGCG
GCGGTCTTTG CCGACGTTAC CGAGCGCGTG GCCGACCAGC CCGTTGTCAT CGCGGTGCAG
CGCGCCCTGG CCCTGGTGTT GCCGCTGGTC ACGGTGGGCG CCTTTGCGCT GATGGTGCGG
CACACCCCCT TCCCCCTGCT GCGCGCGGCG CTGGACGCAC TGTTCGGCCC GGCGTGGATC
ACCATGGGCG ACGCCCTGGT TTCCGGCACC TTCGGCATCG CATCTCTGGC CGTGCTGTGC
GCCTTCAGCG GCACCATGGC CATGGTGTAC AACCAGCGGC GCGGCGGACA GTTCGTCAGT
CCCGTCATGT CCGCCATCGT CGTGCTGGCC TGTTTTTTCG TGGTCACCAA CCCGGCCAGC
GACATGCCGT GGCGCGACAT GTTCTCCATG GACCGGGGCC TGCTGCTGGC GTTCATGGTT
TCCGTGGGCG GAGCGTGGCT GTTCCTGCGC CTGTCGGACG TGAAACGCCT GCAACTGCCG
CTGGAGGCCG TGGGGCACGA CCCGGTGGTG CGCGACATCC TTACCGTCAT GCCCGCAGGC
ATGCTGACCA TCGTTGCCTT CGGCCTGCTG CGCGTGGGCC TTGTGGACAG CGGCATCCCC
GACCTGCACG GTGCCCTGCG TTCTGGAATG ACCCGGCCCT TCATCGAGGG GGGCAACACC
CTGGGCCTCG GCCTGCTGTA CACGGGCCTG TCGCAGGTTT TGTGGTTTTT CGGAGCGCAC
GGCCCCAACC TGCTGTTTCC CATAGAGGAC GCCATCTTCG CTCCCGCCGG GGCGGCCAAT
GCCGCGGCGT TGGCAACCGG CCAGGTTCCG CCTTTCGTGC TGACCAAGAC CTTTTTCGAC
GTGTTCACGC GCATGGGCGG ATCGGGGAGC ACACTGTGCC TCATCGCCGC CATCCTGTAC
GCCAGCCGCG ACAGCGGCAC CCGCAGGCTG GCCCTGGTGG CCCTGCTGCC CGCGCTGTGC
AACGTCAACG AACCACTGCT GTTCGGCCTG CCCCTGGTCA TGAACCCGGT GTACCTGATC
CCTTTCCTGC TGGTGCCGCT GGCGCAGACC GCCGCCGCCC ATGCGGCCAC CCTGCTGCAC
CTTGTGCCGT ACACCCTGCC CGACGTGGTC TGGACCACCC CGCCCCTGCT CAACGGCTAC
GCAGCCACGG GTTCCGTGGC CGGGTCGCTG ATGCAGGCCC TCAACCTGGG CCTTGGCGTG
GCCCTGTACC TGCCCTTCGT GCGGGCGTCC GACGCCCTGC GCGAACGGCA CGGCAGGCAT
ATCCTGGCCG AACTGCTGCG TACCGCCAGC GGCAGCGAGG TGGGGCCGGC CGGGCGCAAG
TGCATCGACC GTCCCGGCGA GCAGGGGCGC ATTGCCTCCT CCCTGGCCAA CGACCTGGCC
GCAGCCCTGG CCCGCAATGG CGAAGTGTTT CTGGAGTACC AGCCGCAAAT ACGGATGGAT
GGCCGAGCGC ACGGGGCCGA GGCGCTGCTG CGGTGGCACC ACCCGGCTTA CGGGCGCATC
GCGCCGCCCA TCACCGTGGC CCTGGCGGAA GACACCGGCA TCATCGACCG GCTGGGCATG
TTCGTGCTGC ACCGCGCGTG CGCCCGGCGC GTGGCATGGA CGGGGGAGGT GCCCGACGGC
TTCGTCATGT CGGTCAACGT GGCCCCGCGC CAGTTGCAGA ACCCGCGCTT CGACCGCGAC
GTGCTGGCCG TGCTGGCGCG CACGGGCCTT GCCCCGCACC TTCTGGAACT GGAACTGACA
GAATCCACCG TACTGCTGCC CGACGCACGC ACCGTAGCTG CATTGCGCCG CCTGCGCGCC
GCCGGGGTGC GCGTGGCCAT CGACGACTTC GGCATGGGGC ATGCCTCGCT GCGCTACCTG
CGCGATTTTC CGGTGGACAC GGTGAAGATC GACCGTTCGC TCACCGAAGC CAGCCACGGC
GACGTCAACG AGCACATCGT GCGCAGCATC GTGGAACTGG CCCGCAGCCT GGACATCACC
ACCCTGGTAG AAGGGGTGGA ACGGCGCGAG CAGTTCGAGC GTTTCGTCGA GCTGGGGTGT
CTGGTCTTTC AGGGCTACCT GTTCAGCCGC CCGGTGAGGG CCGTCCAGTG CCTGGAGGTG
GTGAGCGGAT GGGGCGGGCA CGCGGCTGCG CCGGAGCAGG CCGTACCGGA CATCCCCAAA
GGCGCATAG
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| Protein sequence | MKAGSAEETV APSTGGERIM GDAVADNAAN RAAPWWRPLA AVFADVTERV ADQPVVIAVQ
RALALVLPLV TVGAFALMVR HTPFPLLRAA LDALFGPAWI TMGDALVSGT FGIASLAVLC
AFSGTMAMVY NQRRGGQFVS PVMSAIVVLA CFFVVTNPAS DMPWRDMFSM DRGLLLAFMV
SVGGAWLFLR LSDVKRLQLP LEAVGHDPVV RDILTVMPAG MLTIVAFGLL RVGLVDSGIP
DLHGALRSGM TRPFIEGGNT LGLGLLYTGL SQVLWFFGAH GPNLLFPIED AIFAPAGAAN
AAALATGQVP PFVLTKTFFD VFTRMGGSGS TLCLIAAILY ASRDSGTRRL ALVALLPALC
NVNEPLLFGL PLVMNPVYLI PFLLVPLAQT AAAHAATLLH LVPYTLPDVV WTTPPLLNGY
AATGSVAGSL MQALNLGLGV ALYLPFVRAS DALRERHGRH ILAELLRTAS GSEVGPAGRK
CIDRPGEQGR IASSLANDLA AALARNGEVF LEYQPQIRMD GRAHGAEALL RWHHPAYGRI
APPITVALAE DTGIIDRLGM FVLHRACARR VAWTGEVPDG FVMSVNVAPR QLQNPRFDRD
VLAVLARTGL APHLLELELT ESTVLLPDAR TVAALRRLRA AGVRVAIDDF GMGHASLRYL
RDFPVDTVKI DRSLTEASHG DVNEHIVRSI VELARSLDIT TLVEGVERRE QFERFVELGC
LVFQGYLFSR PVRAVQCLEV VSGWGGHAAA PEQAVPDIPK GA
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