| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0192 |
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| Symbol | |
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| ID | 7172071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 208626 |
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| End bp | 211379 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643538689 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_002434620 |
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| Protein GI | 218885299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0135151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGC TTCCGGTGGA CGCCATCCTG CCGCGCCTGC TCGGAGTGCT GGTCGATGGC
GCGCGCGCGG TGTTGCAGGC CCCGCCCGGC GCGGGCAAGA CCACCCGCGT GCCGTTGGCC
CTGCTGGCGG CCCCGTGGCT GGCTGGGCGC AAGGTGGTGC TGCTGGAACC GCGGCGTCTT
GCCGCGCGGG CGGCGGCCCG GCGCATGGCC GCCACCCTGG GCGAGGCGGT GGGCGACACC
GTGGGCTACC GCATGCGGCT GGATACCCGC GTGGGGCCGC GCACCCGCGT GGAGGTGGTG
ACCGAAGGCG TGCTGACGCG CATGCTCCAG GCCGATCCGG AACTGGCCGA CGTGGGATGC
GTGATCTTTG ACGAATTTCA CGAACGCAGC CTGCATGCCG ACCTTGGCCT GGCCCTGTGT
CTGGATTGCC AGGAGGGGCT GCGGCCAGAC CTGCGGCTGG TGGTCATGTC GGCCACGCTG
GACTGCGGCC CGGTGGTTGC GCTGCTGGGC GGCTGTCCGG TGATCGAAAG CGCGGGGCGC
GCCTTTCCGG TGGATACCCG TCACCTGCCG CCCGTGCGCA ACTGGCTGCC CTACGAGACC
ACCCCGCCCG GCGTGCTGGA GGACGCGGTG GCCGACGCCG TGCGCCGCGC CCTGCACGAG
ACGCCGGGCA GCCTGCTGGT GTTCCTGCCG GGGGCGGGGG AAATCCGCCG CACGGCGGAA
AGGCTGGCGG GGCTGTCCGC AACCCCGCAC GGCCCGGTGG CGGTGCATGC CCTGTATGGC
GACCTGGCCC CGGAGCTTCA GGACGCGGCC ATCGCACCCG CGCCGCCCGG CACGCGCAAG
GTGGTGCTGG CCACGGCCAT TGCAGAGACC AGCCTGACCA TAGACGGCGT GCGGGTGGTC
ATCGACGCCG GGCTGGCGCG GGTGCCGCGC TTCGACCCGC GTTCCGGCAT GTCGCGATTG
GTGACGGAGC GGGTCTCGCT GGCCGGGGCG GACCAGCGCC GGGGCCGTGC CGGGCGCACG
GAGCCGGGCA CCTGCTGGCG GCTGTGGCGC GAAGGGGAGG AGGCCGCGTT GCGCCCCTTT
GCCCGCCCGG AAATTCTGGA TGCCGACCTT GCCCCGCTGC TGCTGGAACT GGCCCTGTGG
GGCGTGCCGG ATGCCTCGGC CCTGCGCTGG CTGGATGAAC CGCCGCAGGC CAACCTGGCC
CAGGCGCGCG AACTGCTGAT CCTGCTGGGC GCGCTGGACG GGGCAGGGCG CATCACGCCG
CACGGCAGGC GGGTGGCCGT GTTGCCGCTG CATCCGCGCC TGGCGCACAT GGTGGTGCGG
GCCGAAGAAC TGGGGCTTGG CGCCACGGCC TGCTGCGTGG CGGCGCTGCT GGAGGAACGC
GACCCGCTGC GCGACGCGGG TGCGGACCTG CGGCTGCGGG TGGCCCTGCT GGCCGGTGAT
GGCCGCAGGA CGGGCAACGC GGGCGGTGGC CCCATGGTTG TCCGCTTGCG CGAGGCGGCC
CGGCAGGTGG CTCGACTGGC GGGGGTGGAT ATTGATGCCG CCGCAGGCAA GGGCAAGGGG
GCACATCCGG GCACGCGGCC CGACCCGGAA GCCACGGGCG AGGTGCTGGC CCTGGCCTAC
CCGGACCGGG TGGCCGAGGG GCGCGGACAG GGGCAGTTCC GCCTGGCCTG CGGGCGCGGG
GCATATCTGC CGCCGGAAGA CCCGCTGTCG CGCGAAGCTT TTCTGGCCGT GGGCGACATG
GACGGCGATG CGGCGCGCGG GCGCATCCGC CGTTGCGCGC CGTTGGCGCG GGAACACATC
GAGGAAGCTT TTGGAGCGTC CATTGCCGAG GGGGCCTTCG TGGTCTGGGA CGCCCGGACC
GAGGCCGTGG CCGCGCGGCG GCAGCGGCGG CTGGGCGCGT TGGTGCTGGA CGACGCGCCC
CACGACGCGG CGGACCCGGA GGAGGTCACG GCGGCGGTGG TGGCGGGCAT CCGGTCCATC
GGGCTGCATT GCCTGCCGTG GACGCCGGAA CTGGAACAAT GGCGCGCGCG GGTGGCCTTG
CTGCGCGGGC TGGACGCGGG CGGGACGGGC CGGGCGGCGG AAGGTTCGCA GCCCATGCCT
CCCCGCCCGG ACAAGTCTGC CTGCCCGGTC GAGTCTGCCT GTCGGGTCGA GTCTGCCGGT
CCGGACGAGT CTGCCTGTCA GGGTGATTCC ATCTGGCCGG ATGTGTCCGA AGGAGCCCTG
CTGGCAGGGC TGGAGCACTG GCTGGCCCCG TATCTGTCCG GCATCACCCG GCGCGCGCAG
TTCGCGCGCA TCGACCTTGC GGGTGCGCTG GCGGCCCTGC TGCCGTGGGA ACTGACGCGG
CGGCTGGACG CCGAGGCCCC GGAGCGCATT GAGGTGCCGT CCGGCTCGCA GGTGCTGGTG
GACTACGCGG CGGAAGGCGG TCCGGTGCTG GCGGTGAAGT TGCAGGAAAT GTTCGGCGCG
GGCGAAACAC CCCGCGTTGC CGGGGGGCGC GTGCCGCTGG TGGTGCACCT GCTGTCGCCC
GCCGGGCGGC CCTTGCAGGT CACGCGCGAC CTGGCCGGGT TCTGGCGCAC CGGATACCCT
GCGGTACGGG CCGAGATGCG GGGCCGCTAC CCCAAGCACC CCTGGCCGGA AGACCCTCTG
GCCGCACCGC CCACCCGGCT GACCACGCGG CGCATGCAGC AGGCGGCCAC TGCGGGAGCA
ACTCCGCAGG GCAGCGGAAA TGGCGGCGGC AGGGGCGGAG GGCGCACTCG CTGA
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| Protein sequence | MPRLPVDAIL PRLLGVLVDG ARAVLQAPPG AGKTTRVPLA LLAAPWLAGR KVVLLEPRRL
AARAAARRMA ATLGEAVGDT VGYRMRLDTR VGPRTRVEVV TEGVLTRMLQ ADPELADVGC
VIFDEFHERS LHADLGLALC LDCQEGLRPD LRLVVMSATL DCGPVVALLG GCPVIESAGR
AFPVDTRHLP PVRNWLPYET TPPGVLEDAV ADAVRRALHE TPGSLLVFLP GAGEIRRTAE
RLAGLSATPH GPVAVHALYG DLAPELQDAA IAPAPPGTRK VVLATAIAET SLTIDGVRVV
IDAGLARVPR FDPRSGMSRL VTERVSLAGA DQRRGRAGRT EPGTCWRLWR EGEEAALRPF
ARPEILDADL APLLLELALW GVPDASALRW LDEPPQANLA QARELLILLG ALDGAGRITP
HGRRVAVLPL HPRLAHMVVR AEELGLGATA CCVAALLEER DPLRDAGADL RLRVALLAGD
GRRTGNAGGG PMVVRLREAA RQVARLAGVD IDAAAGKGKG AHPGTRPDPE ATGEVLALAY
PDRVAEGRGQ GQFRLACGRG AYLPPEDPLS REAFLAVGDM DGDAARGRIR RCAPLAREHI
EEAFGASIAE GAFVVWDART EAVAARRQRR LGALVLDDAP HDAADPEEVT AAVVAGIRSI
GLHCLPWTPE LEQWRARVAL LRGLDAGGTG RAAEGSQPMP PRPDKSACPV ESACRVESAG
PDESACQGDS IWPDVSEGAL LAGLEHWLAP YLSGITRRAQ FARIDLAGAL AALLPWELTR
RLDAEAPERI EVPSGSQVLV DYAAEGGPVL AVKLQEMFGA GETPRVAGGR VPLVVHLLSP
AGRPLQVTRD LAGFWRTGYP AVRAEMRGRY PKHPWPEDPL AAPPTRLTTR RMQQAATAGA
TPQGSGNGGG RGGGRTR
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