Gene DvMF_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0185 
Symbol 
ID7172064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp202524 
End bp203375 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID643538682 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_002434613 
Protein GI218885292 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.00128944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATATCG AAGTCTACGG CGAATACAAG AAGACCGCGT GGTGCCCCGG CTGCGGCAAC 
CACGACGTGA TGAAGGCCGT GCGCCAGGCG CTGGCCGGGC TGGACCTTGC CCCCAACAGG
GTGGCGCACG TTTCCGGCAT CGGGCAGGCG GCCAAGGCCC CGCACTACAT CGATCTCAAC
GGCTTCAACG GTCTGCACGG GCGCGGCCTG CCCCCGGCGC AGGCCATCAA GCTGTGCAAC
CCGGAGCTGA CCGTCATTGC CCAGAGCGGC GACGGCTGCA ACTACGGCGA GGGAGGCAAC
CACTTTCTGG CGGCCATCCG CCGCAACGTG GACATGACCC TGCTGGTGCA CGACAACCAG
ATCTACGGGC TGACCAAGGG GCAGGCCAGC CCCACCACCC CGGAAGGGCA GATCACCAAA
AGCCAGCCCG ACGGGGTGCG CAATGCGCCG TTCAACCCCA TTGCCGTGGC CGTGGCCATG
AAGTGCTCGT TCGTGGCGCG CTCGTTCTCG GGCAACACCC CGCATCTGGT GAAAATGATC
CAGCTGGCCA TCCAGCACAA GGGCTTCGCG CTGGTGGACC TGTTCTCGCC GTGCGTGTCG
TTCAACAAGG TCAACACCTT CGGCTGGTAC AAGCAGCGCT GCCAGGAACT GCCGGAAGAC
TACGATCCCA CCGACTGGGC CGCCGCCATG CAGGTGGCGC AGGAATTCGG CGAGCGCATT
CCCATCGGGG TCATCTACCG CAACGACAGG CCCTCGCTGG ATGCCAGCCT GCCCGTGCTG
CAAAAGGGGC CGTTGGGTCG CCAGCCCGTG GACAGGGACG GGTTGCGGGC GTTGATGCAA
TCCTACACCT AG
 
Protein sequence
MDIEVYGEYK KTAWCPGCGN HDVMKAVRQA LAGLDLAPNR VAHVSGIGQA AKAPHYIDLN 
GFNGLHGRGL PPAQAIKLCN PELTVIAQSG DGCNYGEGGN HFLAAIRRNV DMTLLVHDNQ
IYGLTKGQAS PTTPEGQITK SQPDGVRNAP FNPIAVAVAM KCSFVARSFS GNTPHLVKMI
QLAIQHKGFA LVDLFSPCVS FNKVNTFGWY KQRCQELPED YDPTDWAAAM QVAQEFGERI
PIGVIYRNDR PSLDASLPVL QKGPLGRQPV DRDGLRALMQ SYT