Gene DvMF_0178 details

Gene Information

• Locus tag: DvMF_0178
• ID: 7172054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 194842
• End bp: 195351
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643538672
• Product: outer membrane chaperone Skp (OmpH)
• Protein accession: YP_002434606
• Protein GI: 218885285
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2825] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 57
• Fosmid unclonability p-value: 0.00479029
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAAGAT ATGCCCTCGT ACTGCTGGCC CTTGCCGCCA TGGTGGCGCT TGCCGGGTGC 
AACCAGCCCA AGTCCGGCGG CATCGCCGTG GTGAACACCG CCCGCGTCTA CCAGGAAAGC 
GAGGCGGGCA AGGCCGGGGT GAAGCACCTC GAAACGCTGC ACGAGGAAAT GCAGAACCAG 
CTCAACCAGA TGCAGGAATC GCTGCAGAAG GACCAGAGCG ACGACAACAA ACGCAAGTTC 
CAGGAAGCCT TTGCCGACTA CCAGAAGCGC ATGGGCGCCG AACAGCAGCA GGTCATTTCC 
GTCCTGAACG AAAACCTGCA GAAGGTGCTG GATTCCTACC GCGAAAAGAA CGGCCTCGAC 
GTCATCGTGG GCAACGACAA CGTGCTTTCC GCCGGTCCCA GCGCCGACGT CACCGGCAAC 
ATCGTGGCCG AACTGAACAA GCTGAACATC AACTTCAAGC GCATGGAAGC GGAAGCCCCG 
GCCAAGCCGG CGGAAGCCCC CAAGCAGTAG 

 

Protein sequence

MKRYALVLLA LAAMVALAGC NQPKSGGIAV VNTARVYQES EAGKAGVKHL ETLHEEMQNQ 
LNQMQESLQK DQSDDNKRKF QEAFADYQKR MGAEQQQVIS VLNENLQKVL DSYREKNGLD 
VIVGNDNVLS AGPSADVTGN IVAELNKLNI NFKRMEAEAP AKPAEAPKQ