| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0174 |
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| Symbol | miaA |
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| ID | 7172050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 190667 |
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| End bp | 191680 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538668 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_002434602 |
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| Protein GI | 218885281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.00298523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCTCT CCGATAATTT CGCAGATTCA TTGATCAGTG CCCCTCCCAT CCGCGTGATC
TGTCTGGTCG GCCCCACGGG GGCGGGCAAG ACGGCGGCGG CGCTGCATCT GGCGCGCACC
TTCGGGGGCG GGGTGGTCAA TGCCGATTCG CGGCAGGTCT ACCGCGATTT CCCCGTCATC
ACCGCCCAGC CCTCGCCGGA GGAGCGCGCG GTGTGCCCGC ACCTGCTGTA CGGCTTTCTG
CCCAGCACGG AAAAGATCAG CGCGGGCGTG TGGACAGACA AGGCCACGGT GGTCATCGAG
GAACTTTGCC GGGAAGAGCC GGGCCACAAC ACGTCGCGCC AGGCCACGTC GCGTCCAGAC
GGGTTGGTGC CCCTGCTGGT GGGCGGTACC GGCCTGTACC TGAAGACCCT GCTGGACGGC
ATTGCCGACA TCCCCCGCGT GGACCCGGCC ATCGGTGCGC GGCTGGAACG CGAATGCGAT
GCGCTGGGCG CGCCTGCGCT GCATGCCCGG CTGGCCTCCA TCGATCCGGA CTATGCCGCC
CGCATCCACC CCAACGACCG GCAGCGCGCC GTGCGGGCGC TGGAGGTGCA CGAGGGCACC
GGGCACGCCC TGTCGTGGTG GCATGCCCGG CCCGTGCCGC GACCGCGTTA CGCGGCGTTG
CGCATCGGCA TGGACATGAG CCTCGACGAA CTGACGCCCC GGCTCGACCG CCGCATCGAC
CTGATGCTGG AGGCGGGCGC GCTGGACGAG GCCCGCGCGG CGCGCACCGT GTGCGACGAC
CCCGCCGCGC CCGGCTGGTC GGGCATCGGC TGCGCCGAAC TGTATCGCTA CCTCACCGGC
GAACTGCCCT GGGCCGAGGC CCGGCTGCTG TGGCTGCGCA ACACCCGCGC CTACGCCAAG
CGGCAGCTGA CGTGGTTCCG GGCCGACAAG CGCATCCACT GGGTCAGGCC GGACGACCTC
GACGCCATGG CTGCGCTGGC GTGCGCCTTC CTGCGCGGCG AGACAGCGGA GTAG
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| Protein sequence | MSLSDNFADS LISAPPIRVI CLVGPTGAGK TAAALHLART FGGGVVNADS RQVYRDFPVI
TAQPSPEERA VCPHLLYGFL PSTEKISAGV WTDKATVVIE ELCREEPGHN TSRQATSRPD
GLVPLLVGGT GLYLKTLLDG IADIPRVDPA IGARLERECD ALGAPALHAR LASIDPDYAA
RIHPNDRQRA VRALEVHEGT GHALSWWHAR PVPRPRYAAL RIGMDMSLDE LTPRLDRRID
LMLEAGALDE ARAARTVCDD PAAPGWSGIG CAELYRYLTG ELPWAEARLL WLRNTRAYAK
RQLTWFRADK RIHWVRPDDL DAMAALACAF LRGETAE
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