Gene DvMF_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0169 
Symbol 
ID7172045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp185305 
End bp185832 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID643538663 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002434597 
Protein GI218885276 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.000421684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGACA ACGCCTTCAT CCTGCCACCC TACGCCCTGC GGGGACCGGC TGGCCCCGTG 
CCCCCTGCCC CGACCGGCTG GACGTGGGAT GCGCTGATGG ATGCCGCCAT CGCACAGGCC
CGCAAGGCCG CAGGCCAAGG CGAGGTGCCC GTGGGCGCGG TGGTGGTGGA CCGGCAGGGG
CGCATCATCG GTACGGGGCA CAACACCCCC GTGGCCTCGC ACGACCCGTC CGCCCACGCG
GAAATGGTGG CCCTGCGCGA GGCCTGCCGC AACACCGGCA ACTACCGGCT GGACGGCGCC
GTGCTGGTGG TGACGCTGGA ACCCTGCCTG ATGTGCGCCG GGGCCATGGT GCATGCCCGC
GTGGCGGGCG TGGTGTACGG CGCGCCCGAC CTGAAGGCCG GGGCCGTCAC TTCCTGCCTG
GACGCGCTGG ACCAGCCTTT CCACAACCAC CGGGTGTGGC ACATGGGCCA CGTGCGCGCG
GCAGAGTGCG GGGCGCTGTT GCAGGAGTTT TTCCGGGAGC GGAGGTAG
 
Protein sequence
MTDNAFILPP YALRGPAGPV PPAPTGWTWD ALMDAAIAQA RKAAGQGEVP VGAVVVDRQG 
RIIGTGHNTP VASHDPSAHA EMVALREACR NTGNYRLDGA VLVVTLEPCL MCAGAMVHAR
VAGVVYGAPD LKAGAVTSCL DALDQPFHNH RVWHMGHVRA AECGALLQEF FRERR