| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0167 |
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| Symbol | |
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| ID | 7172042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 182620 |
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| End bp | 184020 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538660 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002434595 |
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| Protein GI | 218885274 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.000521336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATCC CGTTCTCCCT GGCTTCCATC GTGTGCATGG CCCGCCGGGG CGATGCCGAT
GCCTGGCGGG CGCTGGTGGC CCGGCTGACG CCCTGGGCGC TGGGCCTGGC CCGGCGCAAG
CTGCCGCGCA CGCTTGATGC CGAAGACGCG GTACAGGACG CCTTTCTCAC CTGCTTCCGC
AAGCTCGATT CCCTGCGCTC GCCGGACGCC TTCCCCTCGT GGTTCGCGGC CATCCTCACC
ACCCACTGCC ACCGCATCAC GGCCAGCCGC CCGACGGCCA TTTCGCTGGA AGTGCTGGAC
GACAACGCCC TGCTGCCCGT CACGGCCCGC ACGCCGGAAG ACGAAGTGGG CACCGCGCAA
CTGCTGGCCG CGTGCGATGC CGCCCTTGCC GCCCTGCCCC CGCATCTGCT CGACGTGAAC
CGCCTGCACA TCCGCCACGG GCTTTCCATA CCAGAGGTGG CCGCCGCCTG CGGCCTGCCC
GAAGGCACGG TAAAGAAACG CCTGTTCACC GCCCGCCCGC TGCTGCAACA GCAACTTGCC
CGCTTCCGGG GCGACCTGCT GTTCCGCGTG GGCTACCTGC CCGTCTCCGA CCACCTGCTG
GCCATGTGCG CCGACCACCT GCTGCGCGGT CGGGGCCTGC CCCTGCTTTC GCGCCGCTAC
CTTTCATGGG CCGTACTGGC GGGCGACCTG ACCCATGGCC GCCTGGACGC CGCCTTCATC
ATGGCGCCGC TGGCCCTCAG CCTGCGCGGC GCGGGTGCGC CCCTGCGCTA CGTCATGGAT
GGCCACCACG AGGGCAGTGC GCTGTCCCTG TCGCGGCAGG CGGAGCGGCG CAGGGTCATG
GGGCTGCCGG GGGCTTTCTC CACCCACCGG GTGCTGCTGG CCCATCTGGG GCTGGAATGC
TCCGGCGTCT CGAACCTGCC CACACTGGTC GTCAACCCGT CGTCGGTCAT CGCCTCCATG
CAGCACAACG AGATCGGCGC GTTCTTCTGC GCGGAACCGT GGAGCACCAA ATGCCTGCAC
GAGGGCGTGG GGTACACCGC GTTGCGCTCG GCAGACATCA TGCCCCACCA CCTGTGCTGC
ATCCTTGCCG TGCGCCAGCC CTTTGCGGAC CGGCACGGCC AGGTGGTGGC GGATTACGTG
CGGGCCTTGC TGGCCGCGCG CGACAGGGTG CGCCGAGACC CGGCCTTCGG GGCTGCCGTG
CAGTCCGCCC TCACCGGCGT GGATGCCGGG GTGGCGCGGC AGGTGCTGGA ACGCGAGGCC
GTGACATTCG ACGACCTGGA GCCGGACGCC CCGCGCATGG CCGCCTTTGC CCGCCTGGCC
GTAAACGCGG GCGTGCTGTC AGAACCCGTG GCCCTGCCGG GCTTTGCCTG CCCGGACTTT
CTGCCCGTGC CCGCCCCCTG A
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| Protein sequence | MGIPFSLASI VCMARRGDAD AWRALVARLT PWALGLARRK LPRTLDAEDA VQDAFLTCFR
KLDSLRSPDA FPSWFAAILT THCHRITASR PTAISLEVLD DNALLPVTAR TPEDEVGTAQ
LLAACDAALA ALPPHLLDVN RLHIRHGLSI PEVAAACGLP EGTVKKRLFT ARPLLQQQLA
RFRGDLLFRV GYLPVSDHLL AMCADHLLRG RGLPLLSRRY LSWAVLAGDL THGRLDAAFI
MAPLALSLRG AGAPLRYVMD GHHEGSALSL SRQAERRRVM GLPGAFSTHR VLLAHLGLEC
SGVSNLPTLV VNPSSVIASM QHNEIGAFFC AEPWSTKCLH EGVGYTALRS ADIMPHHLCC
ILAVRQPFAD RHGQVVADYV RALLAARDRV RRDPAFGAAV QSALTGVDAG VARQVLEREA
VTFDDLEPDA PRMAAFARLA VNAGVLSEPV ALPGFACPDF LPVPAP
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