| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0130 |
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| Symbol | |
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| ID | 7172005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 143616 |
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| End bp | 147137 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643538624 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002434559 |
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| Protein GI | 218885238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.103911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT TCGTTCATCT GCATTGCCAC ACCGAATACA GCCTGCTCGA CGGGGCCATC
CGCCTGAAGG ACCTGTGCGC CAAGGCGGTG GACTTCGGCA TGCCCGCCGC CGCCATCACC
GACCACGGCA ACCTTTACGG CGCAGTCTAT TTCTACAATA CCTGCAAGCA GTTCGGCATA
AAGCCCATCA TCGGCTGCGA AGTCTACGTG GCCAACGACC ACACGGACAA GACCTCGGAG
CTGGCCCGCG TGCGCCACCA TCTGGTGCTT CTGGCGCGTG ACAACGAAGG CTACCACAAC
CTAGTCAAGC TGGTATCCCA CGGCTTTCTG CACGGCTTTC ACTACAAGCC GCGCGTGGAC
ATGGACCTGC TGCGCCAGTA CTCGGGCGGC ATCACCGCCC TTTCCGCCTG CCTGGCCGGA
CAGGTGCCGC GCGCGCTCCT GCGCAGCGGC ATGGACGACG CCATCCGCAT CGCCCGCGAA
TACGAAGCCA TCTACCCCGG CAACTTCTAT CTCGAATTGC AGTCCAACGG CCTGAAGGAA
CAGGACGAGC TGAACGAGAA GCTCATCGAG CTCGCCGACC ACACCGGGCT GCCCCTGGTG
GCCACCAACG ACTGCCACTA CCTGGAAGCC AGCGACGTGG AAGCCCACGA CGTGCTGCTG
TGCATCCAGA CCCAGGCCAA GGTGGACGAC GAGCGCCGCA TGCGCTTCGA GACCAAGGAG
CTGTACTACA AGTCGCCGGA GGAAATGGCC AAGGCGTTCG CCCACGTGCC CGACGCCGTG
GCCAACACCG GGCGCATCGC CGAGCAGTGC GCGGTGAAGT TCGAATTCGG CAAGTACGTC
TTTCCCGTGT ATGCCCTGCC AGAGGGCATG ACCCTGGAGG ACGAGTTCCG CCGCCTCTCG
CGCGAAGGGC TGAAGCGCCG CCTGGAACGC CACCCCAACC GCGACACCAT CGACCACGAC
CTGTACTGGA AGCGCCTTGA GCTGGAACTG GACGTCATCG GCCAGATGGG CTTTCCCGGC
TACTTCCTCA TCGTGCAGGA CTTCATCAAC TGGGCCAAGG ACAACGGCAT TCCCGTAGGC
CCGGGGCGTG GTTCCGCCGC CGGTTCGCTG GTGGCGTGGT CGCTGCGCAT CACCAACCTC
GATCCCATCC CGTACAACCT GCTGTTCGAA CGCTTCCTGA ACATCGAACG CGTGTCCATG
CCCGATATCG ACGTGGACTT CTGCGAACGC CGCCGTACCG AGGTCATCCG GTACGTGGGC
GAGAAGTACG GCGAAGACAT GGTGGCGCAG ATCACCACCT TCGGGAAGAT GAAGGCGAAA
GCGGTGGTGC GCGACGTGGG CCGCGCCCTG GGCATGACCT TTGCCGAGAC CGACCGCATC
GCCAAGCTGG TGCCCGAAGA CCTGAAGATG ACGGTCAAGA AGGCCATCGA CGCGGAGCCG
GACCTGGCCG CGCTGTACAA GACCGATCCG CAGATCCGCA AGCTGCTGGA CGTTTCCATG
CGGCTTGAAG GGCTTTCGCG CCATGCCTCC ACCCACGCGG CGGGCGTCGT GGTTTCCGAC
AGGCCCATGC GCGAGTACCT GCCGCTGTAC CGGGGAAAGA AGGGTGAAAT AGTCACCCAG
TTCGACATGA AGATGGTCGA GAAGGTCGGG CTGGTGAAGT TCGACTTTCT GGGCCTGCGC
ACCATGACCC TGGTGCAGGA TTCGCTGGAC GAGATCGCCC GGCAGGGCAA GACCCCGCCC
GACCTCGACA CCCTGGCCCT GGACGACGCG GAAACCTACG AACTGTACTC GCGCGGGGAC
ACCGACGGCA TCTTCCAGGT GGAAAGTTCG GGCATGCGCC AGTACCTGCG CATGCTCAAG
CCGTCCTGCT TCGACGACGT CATCGCCATG CTGGCCCTGT ACCGGCCCGG CCCGCTGGGT
TCGGGCATGG TGGACGAATT CATCAAGCGC AAGCACGGCG AGGTGCCCGT CACCTACCCC
CTGCCCTCGC TGGAAGACTG CCTGCGCGAT ACCTACGGCG TCATCGTGTA CCAGGAACAG
GTGATGCAGA TCGCCCAGAT CGCGGCGGGC TACACCCTGG GCGGCGCGGA CCTTCTGCGC
CGCGCCATGG GCAAGAAGAA CGCCGAGGAA ATGGGCCAGC AGCGCATCAA GTTCGTGGAG
GGCGCGCAGA AGAACGGAGT TCCCAAGGCC ACGGCCGACG AAATCTTCGA CCTGATGGAA
AAGTTCGCGG AGTACGGCTT CAACAAGTCG CACAGCGCGG CCTATGCGCT CATCTCGTAC
TACACCGCGT ACCTGAAGGT ACACTTTCCC ACGGAATTCA TGGCCGCCCT GCTCACGTCG
GAAATGGGCA ACCAGGACAA GCTGCTGAAG TACGTGGCCG CGTGCAAGGA CATGGGCATC
GCCGTGTTGC AGCCCAACGT GCAGGCCAGC CGCCGCGAAT TCACCGTGCA CGAGGGGGCC
ATCGTCTTCG GCCTTGGCGG CATCAAGAAC GTGGGCGACG AAGCCATCCG CGAAATCGTG
GATGCCCGCG AGGAAGGCGG GGTGTTCGCC TCGCTGCTGG ACCTGTGCAT GCGCGTGAAC
CTGCGCAAGG TGACCAAGCG CGTGCTGGAA AGCCTGATCA AGGGCGGCGC GTGCGATTGC
CTGGGCTGCA CCCGCGCGGG CATGCTGGCC GCGCTGGACA ACGTGGTCAG CAAGGCCCAG
AAGCGCCTGA AGGACAAGGA ATCCAACCAA GTTTCGCTGT TCACCATGGT GCCGGAAGAA
CCCGCCGTGT GCCCCGGCAT CGGCTTCGAC TGCGAAGAGC AGCAGGCCCA GGAGTGGGAC
GACGACCAGA AGCTGCGCTT CGAAAAGGAG GCGCTGGGCT TCTTCCTGAC CAGCCATCCG
CTCCAGCCCT ACCGCAAGGA ATTGTTCCGC CTGCGCCTTA CCCCGCTGGA AGAAACGCGG
GACATGGCCC CCGGCATGTC GCTGAAGACC GCCGTGCTGG TCACCGGCAT CAAGGAGCAC
ATGACCAAGA AGGGCGCGCG CATGGCCTTC CTGCAGGTGG AAGACCTTAC CGCGTCCGGC
GAATGCGTGT TCTTTCCCGA ACCGTACGCG GAGTTCCGCG AACTGCTGAA GTCCGACCAG
CCGCTCTTGC TGGAGGCCAC CATCAGCAAG CAGCAGAACG ACGACGGCGG CAGGAACGGC
GGGGGCGGTG ACGGCATGTC CGGTTCGGCA GGCATGACCG AAGACGACGA CGACACCCCG
CGCGAAATCA AGCTGCTGGG CGACAAGGTC ATTCCGCTGG CCCGCGCCTG CGGCGCCAGC
GACCAGCCCG TGACCATCGA CATGCCCCTG CCCCGCGTGG AGCCCGCCAG CCTTGCCGCC
CTGCGCGCCA TTCTGGAGCG GCATCGCGGC CCGGTGCCGG TGAACGTGCG CCTGGTGGTG
GACGAGTCCG AATGCCTGTT GCAGTTCGGC CCGCAGTGGA TGGTCCAGCC CGGCCCGGCG
TTCGAGACGG ATATCGCCCA CTGGACCGAA GGCCCGGAGT AG
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| Protein sequence | MSDFVHLHCH TEYSLLDGAI RLKDLCAKAV DFGMPAAAIT DHGNLYGAVY FYNTCKQFGI
KPIIGCEVYV ANDHTDKTSE LARVRHHLVL LARDNEGYHN LVKLVSHGFL HGFHYKPRVD
MDLLRQYSGG ITALSACLAG QVPRALLRSG MDDAIRIARE YEAIYPGNFY LELQSNGLKE
QDELNEKLIE LADHTGLPLV ATNDCHYLEA SDVEAHDVLL CIQTQAKVDD ERRMRFETKE
LYYKSPEEMA KAFAHVPDAV ANTGRIAEQC AVKFEFGKYV FPVYALPEGM TLEDEFRRLS
REGLKRRLER HPNRDTIDHD LYWKRLELEL DVIGQMGFPG YFLIVQDFIN WAKDNGIPVG
PGRGSAAGSL VAWSLRITNL DPIPYNLLFE RFLNIERVSM PDIDVDFCER RRTEVIRYVG
EKYGEDMVAQ ITTFGKMKAK AVVRDVGRAL GMTFAETDRI AKLVPEDLKM TVKKAIDAEP
DLAALYKTDP QIRKLLDVSM RLEGLSRHAS THAAGVVVSD RPMREYLPLY RGKKGEIVTQ
FDMKMVEKVG LVKFDFLGLR TMTLVQDSLD EIARQGKTPP DLDTLALDDA ETYELYSRGD
TDGIFQVESS GMRQYLRMLK PSCFDDVIAM LALYRPGPLG SGMVDEFIKR KHGEVPVTYP
LPSLEDCLRD TYGVIVYQEQ VMQIAQIAAG YTLGGADLLR RAMGKKNAEE MGQQRIKFVE
GAQKNGVPKA TADEIFDLME KFAEYGFNKS HSAAYALISY YTAYLKVHFP TEFMAALLTS
EMGNQDKLLK YVAACKDMGI AVLQPNVQAS RREFTVHEGA IVFGLGGIKN VGDEAIREIV
DAREEGGVFA SLLDLCMRVN LRKVTKRVLE SLIKGGACDC LGCTRAGMLA ALDNVVSKAQ
KRLKDKESNQ VSLFTMVPEE PAVCPGIGFD CEEQQAQEWD DDQKLRFEKE ALGFFLTSHP
LQPYRKELFR LRLTPLEETR DMAPGMSLKT AVLVTGIKEH MTKKGARMAF LQVEDLTASG
ECVFFPEPYA EFRELLKSDQ PLLLEATISK QQNDDGGRNG GGGDGMSGSA GMTEDDDDTP
REIKLLGDKV IPLARACGAS DQPVTIDMPL PRVEPASLAA LRAILERHRG PVPVNVRLVV
DESECLLQFG PQWMVQPGPA FETDIAHWTE GPE
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