Gene DvMF_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0129 
Symbol 
ID7172004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp143165 
End bp143557 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID643538623 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_002434558 
Protein GI218885237 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.249671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAT CCATCTGGCG GCTGACCGTG CGCTCGGAGT TCTGCGCCTC GCACGCGCTG 
CGCCATTACG AAGGCAAATG CGAATCCATG CACGGCCACA ACTTTGCCGT GGAAATGGTG 
GCCGAGGGCG ACCGCCTGAC CGGCGACACG GAAATCGTGC TGGATTTCAA GGTGCTGAAG 
CGCGAACTGA ACGCGGTGCT CGACACCCTG GACCACAAGA ACCTGAACGA CGTCACGCCG 
TTCGACACCA TCAACCCCTC GTCCGAGAAC CTTTCACGGC ACATCTGGCA ACAACTGGCC 
CCGCGCCTTG CCCCGCACGG GGTGCGCCTG CACTCCGTCA CCGTGTCGGA AAAGGCCGCC 
CAGTCGGCCA CCTACATGGA AATCGACGAA TAG
 
Protein sequence
MKKSIWRLTV RSEFCASHAL RHYEGKCESM HGHNFAVEMV AEGDRLTGDT EIVLDFKVLK 
RELNAVLDTL DHKNLNDVTP FDTINPSSEN LSRHIWQQLA PRLAPHGVRL HSVTVSEKAA 
QSATYMEIDE