| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0111 |
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| Symbol | clpX |
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| ID | 7171986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 120238 |
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| End bp | 121776 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538605 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_002434540 |
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| Protein GI | 218885219 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.293147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATA CCAAGGGCGG CTCGGAACGC GAGCTGCGTT GTTCCTTCTG CGGCAAGGGG
CAGGACGCCG TGCAGCGCCT CATTGCCGGG CCCGGCGTCT ACATCTGCGA CGAATGCGTC
TCGTTGTGCA ACGAGATCAT CGCGCAGGAG CACATCACCG AAACGGTGGA AGAGGGCAAG
CTGCTCACCC CCGCCGAGAT CAAGGCCAAG CTCGACGAAT ACGTGATCGG CCAGCACCAG
GCCAAGAAGA TCCTGTCCGT GGCGGTGCAC AACCACTACA AGCGGGTCTT CTTCGCCAGC
GCCCTTGGCG GCGAGGTGGA GCTGGAAAAG AGCAACATCC TGCTCATCGG TCCTTCCGGC
AGCGGCAAGA CCCTGCTGGC GAAAACCCTG GCCCGCGTGC TGAAGGTGCC CTTCGCCATC
GCCGACGCCA CCACCCTGAC GGAAGCCGGC TACGTGGGCG AGGACGTGGA GAACATCCTG
GTCCAGCTGC TCCAGAATGC CGACTACGAC ATCGAGGCGG CGTCCAAGGG CATCATCTAC
ATCGATGAAA TCGACAAGAT CTCCCGCAAG GGCGACGGCC CCTCCATCAC CCGCGACGTG
TCGGGCGAAG GGGTGCAGCA GGCCCTGCTG AAGATCATCG AAGGCACCGA AGCCAACATC
CCGCCCAAGG GCGGGCGCAA GCACCCGCAG CAGGAATTCA TCAGGATGGA CACCTCGAAC
ATCCTGTTCA TCCTCGGCGG GGCGTTCATC GGGCTGGACA AGCTGATCGG CCAGCGCATC
GGCGGCGGGG CCATGGGCTT CGGCGCCAAG GTGGCCACCC GCAAGGATCT GCCCTTCGGC
GAACTGCTGG GCCAGGTGCA TCCGAACGAC CTCGTCAAGT TCGGCCTGAT TCCCGAATTC
GTGGGCCGCA TCCCCGTGGT CACCCACGTG GAGGAGCTGA GCGAGGACGA TCTGGTGCGC
ATCCTTACCG AGCCCAAGAA CGCGCTGGTG CGCCAGTACC AGAAGCTGTT CGAGCTGGAC
AAGGTGAACC TGCGCTTCAC CGCCAACGCG CTGAAGAGCA TCGCCAGCCA GGCCATCGAA
CGCAAGACCG GCGCGCGCGG CCTGCGCAAC GTCATGGAAT CGGTGATGCT CGACATCATG
TACAAGCTGC CCTCGCAGCA GGACATCAAG GAGTGCGTCA TCAACCGCGC CGTGGTGGAG
AAAAGCCGCG AAACCGGTGA TGATCTACCA CACCGAGGCC AAGACCGGCT CCTAGTGAAT
GCAACGGCGC GGTCCGCAAG GGCCGCGCCG TCATGGTTTT GTCCCGCACC GTGCTGGTGC
GGCCCCGTGA CGCCCGTGAT GCTTATGACG TCCACGGGCA CCCGACCGGC CCCGTTGTCC
CCGTCGCTGG AGTCCGCCCC TTTCCCCATC CACGGGAGAA ACTTTCACGG GGGGCGGCCG
CGCATGGACC ACCCGGCTTG GCGTCAACTG CGGATTTCCG CCCGGTACCC CGCAGGGTAC
CACGGCAATC GCCCCGCCGC CCCTTCGGGG GTGCGTTGA
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| Protein sequence | MANTKGGSER ELRCSFCGKG QDAVQRLIAG PGVYICDECV SLCNEIIAQE HITETVEEGK
LLTPAEIKAK LDEYVIGQHQ AKKILSVAVH NHYKRVFFAS ALGGEVELEK SNILLIGPSG
SGKTLLAKTL ARVLKVPFAI ADATTLTEAG YVGEDVENIL VQLLQNADYD IEAASKGIIY
IDEIDKISRK GDGPSITRDV SGEGVQQALL KIIEGTEANI PPKGGRKHPQ QEFIRMDTSN
ILFILGGAFI GLDKLIGQRI GGGAMGFGAK VATRKDLPFG ELLGQVHPND LVKFGLIPEF
VGRIPVVTHV EELSEDDLVR ILTEPKNALV RQYQKLFELD KVNLRFTANA LKSIASQAIE
RKTGARGLRN VMESVMLDIM YKLPSQQDIK ECVINRAVVE KSRETGDDLP HRGQDRLLVN
ATARSARAAP SWFCPAPCWC GPVTPVMLMT STGTRPAPLS PSLESAPFPI HGRNFHGGRP
RMDHPAWRQL RISARYPAGY HGNRPAAPSG VR
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