| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0107 |
|---|
| Symbol | |
|---|
| ID | 7171981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 115303 |
|---|
| End bp | 116355 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643538600 |
|---|
| Product | selenide, water dikinase |
|---|
| Protein accession | YP_002434536 |
|---|
| Protein GI | 218885215 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.317143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA TCCGTCTGGT CGATTCGGTC AAGGCCGCCG GCTGAGCCGC CAAGGTGGCT
CCGGGGGACC TGGAGCGCAT CCTGGCGGGA CTGCCGCGCG ACCCGTCCGT TGAAGACAGG
GTCATCGTGG GCACGCGGCA CAACGAGGAC GCCGCCGTGG TGCGCCTGCC CGGTGGGCAA
TCCATCGTGC AGACGCTGGA CTTCTTCACG CCCATCGTCA ACGACCCGTA CCACTTCGGG
CGCATTGCCG CGGCCAACGC CCTGTCCGAC GTCTACGCCA TGGGCGGCGA GCCGTGGTGC
GCCATGAACA TCGTCTGCTT TCCGGTCAAG CGGCTGCCGG AATCCATCCT GGCCGACATC
CTGCGCGGCG GGTCCGACGC CTTGCGCGAG GCGGGCGCCG CGCTGGTGGG CGGACACAGC
GTGGAAGACG ACGAGCTCAA GTACGGGCTG TCCGTCACCG GCCTCATTGA TCCGGAGATC
ATCGCCTCCA ATGCCGGGCT GCGCCCCGGC GACCACCTGT TGCTCACCAA GCCCCTGGGC
ACCGGCATCC TGGCCACCGC CGTCAAGGCC AACTGGCCCG GCTGCGACGC GCACGAGGAA
GAACTGTTCC GCTGGGCCTC GCGCCTGAAC AAGGGCGCGG GCCGCGTCAT CCGCGAACTT
CGCCTGAAGG CCGCCACCGA CGTTACCGGC TTCGGCCTTG GCGGGCACTG TCTGGAAATG
GCCGGGGCCT CCGGGGTCAC CGTGGCCCTG GACACCGCCG CCCTGCCCGT GCTGCCCGGC
GTGACGGAAC TGGCTGGCAT GGGGCTGGTG CCGGAAGGCA GCCACGCCAA CCGCGCCCAC
TGCCACAAGC ATGTTCATGT GGCCCCCGGC GTCAGCCCGG TGCTGGTCGA CGTGGCCTTC
GACGCCCAGA CATCGGGCGG CATGCTGCTG GCCGTATCCC CGGACCAGAT GGACGCGGCC
ACGACGCTGC TGGCCGAAAC CGGAGATCCC GCCTACCCCG TGGGCGAAGT GCTGAAACCG
CTGCCTGGCG GCGTTCGCCT ACTGCTGCGG TAG
|
|---|
| Protein sequence | MSRIRLVDSV KAAGUAAKVA PGDLERILAG LPRDPSVEDR VIVGTRHNED AAVVRLPGGQ
SIVQTLDFFT PIVNDPYHFG RIAAANALSD VYAMGGEPWC AMNIVCFPVK RLPESILADI
LRGGSDALRE AGAALVGGHS VEDDELKYGL SVTGLIDPEI IASNAGLRPG DHLLLTKPLG
TGILATAVKA NWPGCDAHEE ELFRWASRLN KGAGRVIREL RLKAATDVTG FGLGGHCLEM
AGASGVTVAL DTAALPVLPG VTELAGMGLV PEGSHANRAH CHKHVHVAPG VSPVLVDVAF
DAQTSGGMLL AVSPDQMDAA TTLLAETGDP AYPVGEVLKP LPGGVRLLLR
|
|---|
| |