Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0091 |
Symbol | rplE |
ID | 7171965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 106583 |
End bp | 107122 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643538584 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002434520 |
Protein GI | 218885199 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.0564705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTC TTGAACAGAT ATACCGCGAG AAAGTGGTTC CGGTATTGCA GAAGGAGTTT AACTACACTT CTTCGATGCA GGTTCCCGGG ATTGAAAAAG TCTCTCTGAA TATCGGCCTC GGCGCCGCGA GCCAGAACAA CAAGTTGATG GAAGAAGCCA TCAAGGAGTT GACCGCCATC GCCGGGCAGA AGGCCGTCGT GACCCGCGCC AAGAAGTCCA TCGCGTCGTT CAAGCTGCGC GAAGGCATGC CCATCGGCTG CCGCGTGACG CTGCGCAAGG AACGCATGTG GGACTTTCTG GACAAGCTGA TGAACTTCGC GCTGCCCCGC GTGCGCGACT TCAGAGGGAT TCCGGACCGT GGCTTCGATG GCCGGGGCAA TTTTACCCTG GGCATCAAGG AACACACCAT TTTCCCCGAG CTGGAAGTGG ATCGCGTTGA CAACCCCAAG GGGATGAACA TCACGATCGT TACCACTGCC CAGACGGACA AGGAAGGCAA GCTGCTGCTC GACCAGCTCG GCATGCCTTT CAAGAAGTAA
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Protein sequence | MTRLEQIYRE KVVPVLQKEF NYTSSMQVPG IEKVSLNIGL GAASQNNKLM EEAIKELTAI AGQKAVVTRA KKSIASFKLR EGMPIGCRVT LRKERMWDFL DKLMNFALPR VRDFRGIPDR GFDGRGNFTL GIKEHTIFPE LEVDRVDNPK GMNITIVTTA QTDKEGKLLL DQLGMPFKK
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