| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0042 |
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| Symbol | |
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| ID | 7171914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 54126 |
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| End bp | 55274 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538533 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002434471 |
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| Protein GI | 218885150 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCC TGTCCATGGC ACTTTGCGTG CTCTGCGCCG TCACCGTGGG GCTGCTGCTT
GTGCACGGCC ATCTGGATGG CGACCGGCAC GACCTGCGGC TGCTGGCATG GGGCAAGGGC
ATGCAGGCCG CGGGCTGGCT GGGCTTCGGC CTTGCCTCCA CGGTTTCAGA CGTATTGCCG
CCGTTCCGCT ACCTGCTGCT GGTGGGGCTG GGCATGGAGG CGCTGGCCAT GCTGCGGGTG
CGCACCGGTC GTCCGGTGCG GGTGTTGCCC TGGCTGGGCG GGCTGGTGGT GCTGCACGCG
GTGCTGGCGA TGGTCGTGGC CGAGCGGCCT TTCGAGGTGC GGGCCTTCGT CCAGACGCTG
GCGGCGGCCC TGCTGTTCCT GCCTTGCGGA GCACTGCTGC TTGCCGCGCC CGACGTGAGG
TCGCAACGCC TCTACCGGGT GACCGGCGGC GCGTACCTGC TGGTGGCGAT GTTCGCGCTG
GCCAGGGGAG GGTACATGCT GGCCCGGCAC GAGGGGGCGG ACCTTCCCGC CGTGCCGCAC
ATGGAGATGG TGGGGCTGCT GCTGTTGCAG GCCCTGGCGT TCATCGGGTG CGTGTGGTTC
GTGGTGGTGC TGCGCGAACG GTACGAGGCG CACATCCACC GTCTGGCCAC CACCGACGCC
CTGACCGGGC TGCACAACCG CCGCCATTTC CTGTCCGCCG CGGAACCAGC GCTGGCCCTT
GCCGCGCGCA AGGGTACTCC GGTGGGCGTG CTGATCTTCG ACGTGGACCA CTTCAAGCGG
GTCAACGATA CCCACGGCCA CTCCGTAGGC GATGCGGTGC TGCGCTGCAT CGGCGAGGTG
CTGCCCACGC TGGTGCGTGG CTATGACGCC ACCTGCCGCT ACGGCGGCGA GGAGTTCGCG
GCGCTGCTGC CAGACGCCGA CGGCGCGGTG ACCGACCTCG TGGGCGAGCG CATCCGGCAG
GGGCTGGAGC AGGCCGGGCG TCAGGCGGCG GAAGAGGGCA GGGCCGTGGT GTTTACCGCG
AGCGTGGGCG GCAGCTGCCG CGTGCCCGCC GGACCGCAGG ATCTGGACGC CCTGCTGGCC
GAGGCGGACG CGGCCCTGTA CGAAGCAAAG CGCGGGGGCC GCAATGCCTA CCGGCGGCAT
GAGGCCTGA
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| Protein sequence | MASLSMALCV LCAVTVGLLL VHGHLDGDRH DLRLLAWGKG MQAAGWLGFG LASTVSDVLP
PFRYLLLVGL GMEALAMLRV RTGRPVRVLP WLGGLVVLHA VLAMVVAERP FEVRAFVQTL
AAALLFLPCG ALLLAAPDVR SQRLYRVTGG AYLLVAMFAL ARGGYMLARH EGADLPAVPH
MEMVGLLLLQ ALAFIGCVWF VVVLRERYEA HIHRLATTDA LTGLHNRRHF LSAAEPALAL
AARKGTPVGV LIFDVDHFKR VNDTHGHSVG DAVLRCIGEV LPTLVRGYDA TCRYGGEEFA
ALLPDADGAV TDLVGERIRQ GLEQAGRQAA EEGRAVVFTA SVGGSCRVPA GPQDLDALLA
EADAALYEAK RGGRNAYRRH EA
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