Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0039 |
Symbol | |
ID | 7171911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 51411 |
End bp | 52319 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643538530 |
Product | ABC transporter related |
Protein accession | YP_002434468 |
Protein GI | 218885147 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATA CGGGTCAGAC CACGGAATCG TCCGCCATCG GGCCACCCGC GCCGCACATC CGGGTGCGCG ACCTGACCGT CTCGTACGGC ACGTTCGTGC TCATGCGCGG GTTGAACTTC GACATCCGGC GCGGCGACAT CTTCATCATC ATGGGCGGCA GCGGCTGCGG CAAGTCCACC CTGCTCAAGG TGCTGGTGGG GCTGAAGCAA CCCGCCTCCG GCACCGTGCA CTACGGCGGC ACCGATTTCT GGGGCGGCGC CCCGGAAGTG CGCGATGCGG TGATGCGCCG CGCGGGCATC CTGTACCAGA GCGGCGCGCT GTGGAGTTCC ATGACCCTGG CCGAGAACGT GGCGCTGCCG CTGGAGCAGT ACACCAGGCT GTCGCGCGCC GAGATCGCGG ACATCGTGTC CTTCAAGCTG GCCCTGGTGG GGCTGGCGGG CTTCGAGCGG TTCTACCCTT CGGAGATCAG CGGCGGCATG CGCAAACGGG CCGGGTTGGC CCGGGCGCTT GCGCTGGACC CGGAGATCGT CTTCTTCGAC GAGCCGTCGG CAGGGCTGGA CCCGGTGAGC GCCCGGCTGC TGGACGACCT GATCCTGGAA CTGCGCGAAA GCCTGGGCAC CACCATCGTG GTGGTCACGC ACGAACTGGC GTCCATTTTC GCCATCGGCA CCAATTCGGT GTTCCTGGAC GTGGAAACAC GCACCATGAC CGCCAGCGGC AATCCCAACA ACATCCTGCG CGAGGCGCGC GACCCCAAGG CCGTGTGCTT CCTGACCCGG GGCGAATCGT CCATGGGCGC GGCACGCAGG CCAGAACCGC GCGAGGCGCC ACCGGGGTGC GTGACGCATT CTGCGGATGA AGCCGGAACA GGGTCGGATG CACCATTCTG CGGCAAGGAG GAACGGTAA
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Protein sequence | MSHTGQTTES SAIGPPAPHI RVRDLTVSYG TFVLMRGLNF DIRRGDIFII MGGSGCGKST LLKVLVGLKQ PASGTVHYGG TDFWGGAPEV RDAVMRRAGI LYQSGALWSS MTLAENVALP LEQYTRLSRA EIADIVSFKL ALVGLAGFER FYPSEISGGM RKRAGLARAL ALDPEIVFFD EPSAGLDPVS ARLLDDLILE LRESLGTTIV VVTHELASIF AIGTNSVFLD VETRTMTASG NPNNILREAR DPKAVCFLTR GESSMGAARR PEPREAPPGC VTHSADEAGT GSDAPFCGKE ER
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