Gene DvMF_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0023 
Symbol 
ID7171895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp29224 
End bp29871 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID643538515 
ProductdTMP kinase 
Protein accessionYP_002434453 
Protein GI218885132 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0182529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCA CCTTTGAAGG AATGGAAGGC TCCGGCAAGA GCACGGCCCT GAACCGCGTG 
CAGCAGGTGT TGCTGGACGC GGGGCACGGG GTGCTGCTGA CGCGCGAGCC GGGCGGCAGC 
CGCTTGGGGC GCACGCTGCG CTCCATCCTG CTGGACCTTT CCAACGACGA CATCGTGCCC 
GAGGCGGAAC TGTTCCTGTA CCTGGCCGAC CGCGCCCAGC ACGTGGGGCA GGTGATCCGC 
CCGGCCCTGG ACGAGGGCGT GGTGGTGCTG TCCGACCGCT ACGCCGACTC CACCGTGGTC 
TACCAGGGCT ACGGGCGCGG GCTGGACCCG GAACGGCTGC GCGAACTGAA CGACATGGCC 
GTGGGCGGGC TGTGGCCCGA CCTGACCCTG GTGTTCGACC TGCCGCCGGA AGAAGGCCTG 
CGCCGGGCCA TGACCCGCAA CCTGCGCGAG GGCACCAGCG TTTCCGAAGG GCGGTTCGAG 
GCGGAGCACC TTGCCTTTCA CGCCCGGGTG CGCGAAGGCT ATCTGACGTG GGCCGCGCTG 
CATCCGGCGC GGTTCCGGGT TGTGGATGCC ACCCGCACGC CCGACGAGGT GTTCGAGGAC 
GTCATGCGCG CCGTGCGGTC CGTCTTGTCG GCCCCGGCGC GTCCATGA
 
Protein sequence
MFITFEGMEG SGKSTALNRV QQVLLDAGHG VLLTREPGGS RLGRTLRSIL LDLSNDDIVP 
EAELFLYLAD RAQHVGQVIR PALDEGVVVL SDRYADSTVV YQGYGRGLDP ERLRELNDMA 
VGGLWPDLTL VFDLPPEEGL RRAMTRNLRE GTSVSEGRFE AEHLAFHARV REGYLTWAAL 
HPARFRVVDA TRTPDEVFED VMRAVRSVLS APARP