| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0008 |
|---|
| Symbol | |
|---|
| ID | 7171880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 10369 |
|---|
| End bp | 10731 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643538500 |
|---|
| Product | transcriptional regulator, TraR/DksA family |
|---|
| Protein accession | YP_002434438 |
|---|
| Protein GI | 218885117 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.0752856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA AGGATATCGA GTACTTCCGC GTATTGCTGA CCCAGATGCT GGAAGAAGCC
ACGCAAAAGG GCGACCTCAC GCTGGAAGAC ATGACGGATA ACAACGAGGT CTTCGCCGAT
CCGGCGGACC GCGCCACCAT GGAATCGGAT CGCGCCTTCA CCCTGCGCAT CCGTGACCGC
GAGCGGCGGC TGATCAAGAA AATTCAGGCG GCGCTGGGCC GCATAGAGGA CGGCTCGTTC
GGCATCTGCG ACGAATGCGG CGAGGAAATC GGCGTGCCGC GCCTGAAGGC GCGACCCGTG
ACCAAGCTGT GCATCAACTG CAAGAGCAAG CAGGAAGACG ACGAGCGCGT CCGAGGCGAT
TAA
|
|---|
| Protein sequence | MDQKDIEYFR VLLTQMLEEA TQKGDLTLED MTDNNEVFAD PADRATMESD RAFTLRIRDR
ERRLIKKIQA ALGRIEDGSF GICDECGEEI GVPRLKARPV TKLCINCKSK QEDDERVRGD
|
|---|
| |