Gene AFE_3302 details

Gene Information

• Locus tag: AFE_3302
• ID: 7136520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2976115
• End bp: 2976510
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643531645
• Product: HIT family protein
• Protein accession: YP_002427655
• Protein GI: 218667369
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCC TGTTCAGCCG CATCATCAAC GGTGAAATCC CGGCGCAGAA AGTGCTGGAA 
GACGACCGTT ATCTGGCCTT TCTCGATATC CGCCCAGTAC GGCCGGGGCA TACCCTGGTC 
ATCCCCAAGG TGGAGCACGA TTATATTTTC ACGCTGGATG ACGCAACCCT GGCGGGGCTT 
CTGCCCTTTG CCAAACGCGT CGTGCCGGCG CTGGAGCAGG TCACCGGCTG CAAGAGGGTC 
GGGATCATGG TGGCGGGGCT GGAAGTGCCC CATGCCCATG TACACCTGAT CCCGATGAAC 
GCCATCCCGG ACCTGAATTT CGCCAATGCC AGAGATACCC CGGCGGCGGA ACTGGCGGCG 
ATGGGGGATA GGATACGCGC GGCGTTGCGG GGTTAA 

 

Protein sequence

MSTLFSRIIN GEIPAQKVLE DDRYLAFLDI RPVRPGHTLV IPKVEHDYIF TLDDATLAGL 
LPFAKRVVPA LEQVTGCKRV GIMVAGLEVP HAHVHLIPMN AIPDLNFANA RDTPAAELAA 
MGDRIRAALR G