| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3301 |
|---|
| Symbol | |
|---|
| ID | 7134332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2975745 |
|---|
| End bp | 2976020 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643531644 |
|---|
| Product | competence protein ComEA helix-hairpin-helix repeat protein |
|---|
| Protein accession | YP_002427654 |
|---|
| Protein GI | 218666380 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.710578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCG CTGGCGCTTG GGCACAGGCG GCCGGGACAG GCTGCCCGGT TCCCGTCGAC
ATCAATCACG CCGATGCGGC CCAGTTGCGC TGTCTGCCGG GCATTGGCGA AAAACGGGCC
GCCGCGATCG TCGCTTTCCG GGAGGCGCAT GGCCCCTTTC CCGGCCCCGC CTCCCTCGCC
GCGGTTGTTG GTCCCAAGAT GGCGCAGACA CTGCGCGCGA GGGTGGTGGT GACCCCCGTT
TCGCCCTTGA CAGAAAAAAC CGCGCTGTTA AGGTGA
|
|---|
| Protein sequence | MMAAGAWAQA AGTGCPVPVD INHADAAQLR CLPGIGEKRA AAIVAFREAH GPFPGPASLA
AVVGPKMAQT LRARVVVTPV SPLTEKTALL R
|
|---|
| |