| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3299 |
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| Symbol | hemD |
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| ID | 7135671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2973994 |
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| End bp | 2974782 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643531642 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_002427652 |
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| Protein GI | 218666649 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.466839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA CCATACTGCG CGGCAAGGGC ATCGTGGTTA CCCGGCCGCG CGCGCAGACC
GGCGAGATGC TGACCCTGTT GGAGGCGCAA GGCGCGCGCC CCATACTGTT TCCCGCCGTA
GAGATCGAGG CGCCGGAGAA CTGGCAATCC CTGGATGACG CCTTGCATCG GCTTGTGACG
TATGACTGGG TGATTTTTTC CAGCCGTAAT GCGGTCGCCT TCGCCCTCAG TCGCCTGCAG
AGCCGCAACC TGTCCTGGCC GGTGGGGCCG CGCATTGCGG CGGTGGGACG GGAGACCGCC
AAGGCGTTGG GTGAGTTTGG TCTGCAGGTC GACCTGGTCC CCCGGCGTTT CAGCTCCGAG
GGTTTGCTGG AAAGTCCCGA ACTGCTGGAC GTGCGTGGGC AGCGCATCGC GCTGTTTGCC
GGTGATCAGG GCCGGGAGCT GCTGGAGAAG ACCCTGGATG AGCGGGGAGC CGTCACCGAC
GAGGTGCTCT GCTACCGGCG CCGGTTGCCC GGCACCAACC CGACGCCGTT GCTGCATGCC
TGGGCGCGCG GCGAGCTGGA TGCGGTCACC GTGACCAGCC CGGAGATCTT CAATAATTTC
TATCAGATGG TGGGGGGACT GGGACAACGC TGGTTGAAAA ACACGCCCAT CATCGCCATC
AGCCCCCTCA CCGCCGAGGC CGTCACCGCG GTCGGTCTGC CCACCCCCTG GATCGCCCCG
GAAGCCAGTA CGGCTGGCAT GCTGGCGGCG CTGACGGTAT GGGCGCAAGG CCTGGCGCCT
CACACATGA
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| Protein sequence | MNSTILRGKG IVVTRPRAQT GEMLTLLEAQ GARPILFPAV EIEAPENWQS LDDALHRLVT
YDWVIFSSRN AVAFALSRLQ SRNLSWPVGP RIAAVGRETA KALGEFGLQV DLVPRRFSSE
GLLESPELLD VRGQRIALFA GDQGRELLEK TLDERGAVTD EVLCYRRRLP GTNPTPLLHA
WARGELDAVT VTSPEIFNNF YQMVGGLGQR WLKNTPIIAI SPLTAEAVTA VGLPTPWIAP
EASTAGMLAA LTVWAQGLAP HT
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