Gene AFE_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3286 
SymbolhynL 
ID7136378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2961350 
End bp2963107 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content66% 
IMG OID643531629 
Product[Ni/Fe] hydrogenase, large subunit 
Protein accessionYP_002427639 
Protein GI218665733 
COG category[C] Energy production and conversion 
COG ID[COG0374] Ni,Fe-hydrogenase I large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC AAACCGTCGT CGTCGATCCC GTCACCCGCA TCGAGGGACA CCTGCGCATC 
GAGGCCGAGG TCAAGGATGG CCTCATCACC GGCGCTTCCA GCTCCGGGAC CATGGTGCGC
GGCCTGGAAA TCATCCTCCA GGGCCGCGAT CCGCGCGACG CCTGGGCCTT CGCCCAGCGC
ATCTGCGGGG TCTGCACCCT GGTGCACGGC ATCGCCTCGG TGCGGGCGGT GGAGGACGCG
CTCCATTACC CCATCCCGCA AAACGCCCAG TTGATCCGCA ACCTCATGAT CGCCGCCCAG
TTCGTCCACG ATCATGTGAT GCATTTCTAT CAACTGCACG CCCTGGACTG GGTGGATGTA
CTCTCCGCCC TCCAGGCGGA TCCCGCCAAA ACGGCCGCGC TGGCCCAATC CCTGAGCGAT
TACCCGCGCT CCTCGCCGGG CTACTTCGCC GAGGTGAAGG ACAAGTTCAC CCGTTTCGCG
GCCTCCGGAC AGCTCGGCAT CTTCGCCAAC GGCTACTGGG GCAACCCCGC CTACAAGCTC
CCGCCCGAGG CCAACCTCAT GGCGCTGGCC CATTACCTGG ACGCCCTGGC CTGGCAGCGG
GAGGTGGCCA AGCTCCATGC CGTCTTCGGC GGCAAGAATC CCCATCCCAA CTTCGTGGTG
GGTGGCGCCC CCACGGCCAT CAGCGTGTCG CCGGCGGCAT TGCACGACGG CGCGGCGGCG
GGGGTCGGGG CCACCGCCGT CAACATGACG GGCCTGGAGA TCGTGCAAAA CGTCATCCGC
GAGATCCGCA GCTTCGTGGA TCAGGTCTAC CTGCCCGACA CCCTCGCCAT CGCCGGCTTT
TACAAGGACT GGTTCCGCAA GGGGGAAGGG GTGGGCAACT TCCTGACCTA CGGCGAGTTT
CCCTCCATGG GCATCAACGA CCTGGACGGC CTCATGATCC CCCGCGGCAT CATCCTCAAC
CGGGATCTCT CCACCGTCCA TCCTCTGGAA CTGAGTGCCC CGGACCAGAT CCAGGAGTTC
GTGGCCCATT CCTGGTATTC CTATACCGTG GGCAAGGACC AGGGACTCCA TCCCTTTGCG
GGACAAACCC ACCTGGACTA TACGGGACCA AAACCGCCCT ACGCGCATCT GGACAGCGAG
GCCAGCTATT CCTGGATCAA GTCGCCGCGC TGGAAGGGCA AGGTGATGGA GGTGGGTCCC
CTGGCCCGGA TGCTGGTCCT CTATGCCAGC GGCAACCAGG AGGCCCGTAC CCTGGTGGAC
AGCAGCCTGC GCAAACTGGG CCTGCCCGTC GAGGCACTCT TCTCCACCAT GGGGCGGACC
GCCGCCCGCA CCCTGGAGAG CAAGATCATC GCCGACGCCA TGCAGGGCTG GTACGACCAG
CTCATGGCCA ATATCCGCGC CGGTGAACTC GAAACCTTCA ACCCGGCCCT CTGGGAACCC
TCCACCTGGC CCGCCGAGGC GCGCGGGGTG GGTTTCATGG AGGCACCCCG TGGTGCCCTG
GCCCATTGGG TGGTCATCAA GGACGGTCTC ATCGACAACT ACCAGGCGGT GGTACCCAGC
ACCTGGAATG CCGGCCCGCG GGATGCCGCC GGGCAGGACG GCCCCTACGA GGCGGCGCTC
AAAGGCACCG AACTCCCTGA CCCCGCCCAG CCCCTGGAGA TCCTCCGTAC CATCCACAGC
TTCGATCCCT GCATCGCCTG CGCCGTCCAT CTGGTGGACC CGACAGGGGA GGAACTGTTG
CAGGTCAAGG TATGCTGA
 
Protein sequence
MAKQTVVVDP VTRIEGHLRI EAEVKDGLIT GASSSGTMVR GLEIILQGRD PRDAWAFAQR 
ICGVCTLVHG IASVRAVEDA LHYPIPQNAQ LIRNLMIAAQ FVHDHVMHFY QLHALDWVDV
LSALQADPAK TAALAQSLSD YPRSSPGYFA EVKDKFTRFA ASGQLGIFAN GYWGNPAYKL
PPEANLMALA HYLDALAWQR EVAKLHAVFG GKNPHPNFVV GGAPTAISVS PAALHDGAAA
GVGATAVNMT GLEIVQNVIR EIRSFVDQVY LPDTLAIAGF YKDWFRKGEG VGNFLTYGEF
PSMGINDLDG LMIPRGIILN RDLSTVHPLE LSAPDQIQEF VAHSWYSYTV GKDQGLHPFA
GQTHLDYTGP KPPYAHLDSE ASYSWIKSPR WKGKVMEVGP LARMLVLYAS GNQEARTLVD
SSLRKLGLPV EALFSTMGRT AARTLESKII ADAMQGWYDQ LMANIRAGEL ETFNPALWEP
STWPAEARGV GFMEAPRGAL AHWVVIKDGL IDNYQAVVPS TWNAGPRDAA GQDGPYEAAL
KGTELPDPAQ PLEILRTIHS FDPCIACAVH LVDPTGEELL QVKVC