| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3279 |
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| Symbol | lysA |
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| ID | 7134875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2955370 |
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| End bp | 2956629 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643531622 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002427632 |
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| Protein GI | 218666233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCT TCCACTACCG CGACCACGCC CTGTACGGCG AAGACCTCCC CTTGCAGGAA
ATAGCGGCGC ATTACGGCAC GCCCTGCTAC GTCTATTCCG AAGCGGCGCT GCGTGAACGC
TATCACTCCT TCAGCGCCGC CCTCGGTGAC AACACCCGGG TCTGTTATGC GGTCAAGGCC
AACAGCAATC TCGGTATCCT GCGGATTTTT GCGGAGATGG GCGCGGGCTT CGATATCGTC
TCCGGCGGTG AGCTGGAGCG GGTGCTGCGG GCGGGCGGCG ATGCCGGCAC CATCGTTTTT
TCCGGTGTCG GCAAATCCAG CGTCGAAATC CGCGCCGCCC TCGGTGCCGG TATCTTCTGC
CTCAATGTCG AGTCCGCCGC CGAACTCTGG CGCATTGCGG ACATTGCTGC CGACATGGGC
AAACGTGCGC CCGTCGCCCT GCGGGTCAAC CCCGACGTGG ACCCCGGCAC CCATCGCTAC
ATCGCCACGG GGCTGAAAGA GAGCAAGTTC GGCATCCCCA TGGATCAGGC CCGCCACCTC
TACCTGCAAG CCGCGCAGCA CCCGGCGCTG GAGCTGAAGG GTATTGCCTG CCATATCGGC
TCCCAGTTGC TGGACCTGAC GCCCCTGGGC GAGGCCGCAG GGCGGGTGCG CGCGCTGTAT
GACGAGCTGG CGGCCCATGG GATTGCCCTC CAGCATCTGG ATCTGGGCGG CGGTGTGGGC
ATTCGCTACC ACGACGAAAT CCCGCCCAGC CCCGCCGACT ACGCCTGGAC GCTGGATCAG
GCTTTGCAAG GCGTAGCGGT ACGGCGGGTA GTGGAACTGG GCCGGGCGCT GGCGGGCAAC
GCCGGCGTGC TGCTGACCAA GGTGGAATAC CTCAAGGACA ACGGCGGCAA GCAGTTCTGC
GTGGTGGATG CGGCCATGAA TGACCTGTTG CGTCCCGCGC TGTACGGTGC CTGGCACGAC
ATCCTGCCCC TGCACCAAAG TGTCGGAACA GGACCAGCCA TGGATGTCGT CGGCCCGGTC
TGTGAAAGTG GCGACTTCCT CGCCAGAGAT CGTCCGCTAG CGGCCAAAGC CGGTGACCTG
CTCGCCGTCA TGAGCGCCGG GGCCTACGGT TTCGCCATGA GCAGCAACTA CAACAGCCGC
CCCCGTCCTC CTGAAGTGCT CATCAGCGGC CACCAGCACC GCCTCATTCG CCGCCGCGAG
ACCCTCGCCG ATCAGTTGTC GCTGGAAGAA AACCCGCCCT CCAGGAAGTC TCCCTTATAA
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| Protein sequence | MNTFHYRDHA LYGEDLPLQE IAAHYGTPCY VYSEAALRER YHSFSAALGD NTRVCYAVKA
NSNLGILRIF AEMGAGFDIV SGGELERVLR AGGDAGTIVF SGVGKSSVEI RAALGAGIFC
LNVESAAELW RIADIAADMG KRAPVALRVN PDVDPGTHRY IATGLKESKF GIPMDQARHL
YLQAAQHPAL ELKGIACHIG SQLLDLTPLG EAAGRVRALY DELAAHGIAL QHLDLGGGVG
IRYHDEIPPS PADYAWTLDQ ALQGVAVRRV VELGRALAGN AGVLLTKVEY LKDNGGKQFC
VVDAAMNDLL RPALYGAWHD ILPLHQSVGT GPAMDVVGPV CESGDFLARD RPLAAKAGDL
LAVMSAGAYG FAMSSNYNSR PRPPEVLISG HQHRLIRRRE TLADQLSLEE NPPSRKSPL
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