| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3277 |
|---|
| Symbol | argH |
|---|
| ID | 7137127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2953803 |
|---|
| End bp | 2955191 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643531620 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_002427630 |
|---|
| Protein GI | 218666834 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AAATGTGGGG TGGGCGCTTC GCGGCGGGCA CCGACCGTCT GGTCGAGGCC
TTTACGGCAT CCATCCAGGT GGACCGTCGT CTGTACGCGG AGGACATCCG TGGTTCCATG
GCTCATGCCC GCATGCTGGG CCGGGTGGGC GTGCTGACGG AAGCGGAGGT GGAGGCCATC
GTCACCGGGC TGGCGCAGGT GCGGCAGGAG ATCGTCGAAG ACCGGCTGCC TTTTGTGGAT
GCCCTGGAAG ACATCCACAT GCACGTCGAG TCGCGCCTCA CCGAAATCAT CGGCGACGTC
GGCAAGAAGC TCCACACCGG CCGTTCCCGC AACGATCAGG TGGCCACCGA CCTGCGCCTT
TATACCCGCG GCGGCCTGGA TGACCTCGTC CGGGGGCTGC AGCACCTGCA AAACGTCTTC
ATCGACCTCG CCGAGCGGGA GGTGGAGACC ATCCTCCCGG GTCTGACCCA CATGCAGGTG
GCCCAACCGA TCAGCTTTGG TCACCATTGT ATGGCCTACG TGGAGATGTT CCACCGCGAT
ACCCAGCGTC TGCTCGATGC ACGACGGCGG GTGAACGTGC TGCCCCTGGG CGCGGCGGCG
CTGGCGGGGA CGACCTTTCC CATCGACCGC TGGGACGTGG CGCGTCAGCT CGGCTTTGAG
GCCGTCGCCG AAAACAGCCT CGATGCCGTC TCCGACCGCG ACTTTGTGAT GGAAGTGTTA
TCGGATCTGG CCATCCTCGC CGTCCACCTC TCGCGGCTGT CGGAAGAGTT GATCCTGTGG
ATGTCGGCCC CCTTCGGCTT CATCGACCTG CCCGACGGCT TCTGTACCGG CTCCAGCATC
ATGCCACAAA AGAAAAACCC GGATGTCGCG GAAATCATTC GTGGCAAGAG TGGGCGGGTG
ATCGGCGATC TTGTCGCTAT CCTCGTTCTC ATGAAGGGCC AGCCCCTCGC CTACAACCGC
GACAATCAGG AAGACAAGGA AACCCTTTTC GACGCCCTTG ACCAGATGCG CGCCAGCGTG
GAGATCATGG GCCGGATGCT GCCGGGCCTG CAGACCCGTC CCGACGTCAT GCGCGCGCAG
GCGGAACGCG GCTTTGCCAC CGCCACCGAT CTGGCCGATT ATCTGGTGCG CAAGGGACTG
CCTTTCCGTG ATGCCCACGC CGTGGTGGGC CGTGCCGTGC GCCTGGCCCA GGAACGCCAC
ATCGGCCTGG AGGCCCTGCC GCTGGCGGAT TTGCAGGCGC TGTCACCGCT CATCGACGGG
GAGGTCTATG CGGTGCTGGT GCTGGAAGGC TCCCTGGCGG CGCGGGATCA CTTGGGCGGT
ACGGCACCCC GGCAGGTGCA GGCCGCCATC CAGCGCGCCC GAGAGCGCCT GCAGCGGGAG
GCCCTGTGA
|
|---|
| Protein sequence | MSEKMWGGRF AAGTDRLVEA FTASIQVDRR LYAEDIRGSM AHARMLGRVG VLTEAEVEAI
VTGLAQVRQE IVEDRLPFVD ALEDIHMHVE SRLTEIIGDV GKKLHTGRSR NDQVATDLRL
YTRGGLDDLV RGLQHLQNVF IDLAEREVET ILPGLTHMQV AQPISFGHHC MAYVEMFHRD
TQRLLDARRR VNVLPLGAAA LAGTTFPIDR WDVARQLGFE AVAENSLDAV SDRDFVMEVL
SDLAILAVHL SRLSEELILW MSAPFGFIDL PDGFCTGSSI MPQKKNPDVA EIIRGKSGRV
IGDLVAILVL MKGQPLAYNR DNQEDKETLF DALDQMRASV EIMGRMLPGL QTRPDVMRAQ
AERGFATATD LADYLVRKGL PFRDAHAVVG RAVRLAQERH IGLEALPLAD LQALSPLIDG
EVYAVLVLEG SLAARDHLGG TAPRQVQAAI QRARERLQRE AL
|
|---|
| |