Gene AFE_3252 details

Gene Information

• Locus tag: AFE_3252
• Symbol: tkt-2
• ID: 7134127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2928732
• End bp: 2930723
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643531595
• Product: transketolase
• Protein accession: YP_002427605
• Protein GI: 218666292
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCGTA CTGATCTGGC GAACGCCATC CGCGTTCTCA CCATGGACGC CGTGGAAAAG 
GCAAAATCCG GCCATCCCGG CATGCCCATG GGCATGGCGG ACATCGCCGA AGTGCTGTGG 
AACGACTTTC TGGTCCACAA CCCCGCCAAT ACCCATTGGG CCAACCGCGA CCGCTTCATT 
CTGTCCAATG GACACGGCTC CCTCCTGCAG TACGCGCTCC TCCATCTCAC CGGCTACGAT 
GTCTCCATGG AAGACCTCAA AAACTTCCGT CAGTGGCACA GCAAGACCCC CGGTCATCCG 
GAGTACCGCG ACACTCCAGG CATTGAAACC ACCACTGGCC CCCTGGGTCA GGGCCTTGCC 
AACGGTGTCG GAATGGCGCT GGCGGAGCGT ATGCTGGCCA GTCACTTCAA CCGCCCCGAT 
CATGAAATCA TCCATCACTA CACGTATGTA TTCCTCGGTG ACGGCTGCCT CATGGAAGGC 
ATTTCTCATG AGGCCTGTTC CCTGGCGGGC GTCTGGGGGC TGGGCAAGCT CATCTGTTTC 
TACGATGACA ACAACATCTC CATTGACGGT CATGTGGGTG ACTGGTTCGC CGACAACACC 
CCGGCGCGTT TCGAGGCTTA CGGCTGGCAT GTGATCCGTC ACGTCGACGG ACATGACCCC 
GAAGCCATCA AAATGGCCAT CGTGGACGCC CGCAAGCAGA CCGACAAGCC CACCCTGATC 
TGCTGCAAAA CCGTCATCGG CCACGGCTCC CCCAACAAGG CCGGCAGCCA TGACTGTCAT 
GGCGCGCCTC TGGGTGCCGA AGAAGTCTGC CTGACCCGGG AAAACCTGGG CTGGTCCGCG 
GAGCCGTTCC AGATCCCCGA GGCCGTCTAC CGCGCCTATG ATGCCCGGGC CAAAGGAGAG 
GCCGCGGAGG CCGACTGGAA GGCCCGTTTC GCCAAATACC GGGAACTCTA TCCCGAAGAG 
GCGGCGGAGC TCGAGCGGCG CCTGGCCGGC ACCCCCGCCA GCGATTTCGA TGCGGCGGTG 
GCGGTGCTCA TCGCCGATTT CCGTAAGACG GCGCCCAAAA TCGCTACCCG CGTGGCATCC 
GGTCAGTGCA TTCAGGCCCT TGCACCGAAG TTGCCCGAAT TTATCGGTGG TTCCGCCGAC 
CTGACGCCTT CCAACAACAC GCGCTGGAAG GAAGCCATCG ACATCGGCCC CCATCGCCTG 
ATGGGCAACT ACATCCACTA CGGCGTGCGG GAATTCGGCA TGTCCGCCAT CATGAACGGC 
GTCGCTCTCT ACGGCGGTTT CCTGCCCTTC GGCGGCACCT TCCTGATTTT CTCCGACTAC 
AGCCGCAATG CGATCCGGAT GTCGGCGCTG ATGGGTATTC GCGTGATCTA TGTGATGACC 
CATGACTCCA TCGGTCTCGG CGAAGACGGC CCCACTCACC AGCCCATCGA GCAGGTCAAC 
AGCCTGCGTC TGATCCCCAA CCTCCATGTC TGGCGCCCGG CGGATGCCGT GGAAACCGCC 
ATCGCCTGGG AATCCTCGGT CAAACTGGAG CGGACGCCGT CCCTGCTGGC CCTCAGCCGG 
CAGAACCTCC CGGCGCTGCC CCACACCGAC GAGACCGTGG CCAATGCCCG GCGCGGCGGC 
TATGTGCTCA AGGAGGCCGC AAACGGCAAG GCCGAGGGTA TCCTGATCGC CACCGGCTCC 
GAAGTGGAGC TGGCGCTGGC GGCCCAGGCC AAACTGGCGG AGCAGGGACA TCACGTGCGC 
GTGGTTTCCA TGCCGTGCAT GAATATCTTT GCGGCGCAGG ACGCGGCGTA TCAGGAACGT 
GTCCTGCCAA GCAGCATCAC CAAGCGTGTG GCCATCGAAG CGGGCACCAC GGGGCTCTGG 
TACCGGTATG TGGGTCTGCA CGGCGCGGTC ATCGGCATCG ACCACTTTGG CGCCTCGGCC 
CCGGCCCCGG TCCTGTTCGA GAAGTTCGGC TTTACGGCGG ATAACGTCGT CGCGCACTTC 
CAGGCACTGT AA 

 

Protein sequence

MTRTDLANAI RVLTMDAVEK AKSGHPGMPM GMADIAEVLW NDFLVHNPAN THWANRDRFI 
LSNGHGSLLQ YALLHLTGYD VSMEDLKNFR QWHSKTPGHP EYRDTPGIET TTGPLGQGLA 
NGVGMALAER MLASHFNRPD HEIIHHYTYV FLGDGCLMEG ISHEACSLAG VWGLGKLICF 
YDDNNISIDG HVGDWFADNT PARFEAYGWH VIRHVDGHDP EAIKMAIVDA RKQTDKPTLI 
CCKTVIGHGS PNKAGSHDCH GAPLGAEEVC LTRENLGWSA EPFQIPEAVY RAYDARAKGE 
AAEADWKARF AKYRELYPEE AAELERRLAG TPASDFDAAV AVLIADFRKT APKIATRVAS 
GQCIQALAPK LPEFIGGSAD LTPSNNTRWK EAIDIGPHRL MGNYIHYGVR EFGMSAIMNG 
VALYGGFLPF GGTFLIFSDY SRNAIRMSAL MGIRVIYVMT HDSIGLGEDG PTHQPIEQVN 
SLRLIPNLHV WRPADAVETA IAWESSVKLE RTPSLLALSR QNLPALPHTD ETVANARRGG 
YVLKEAANGK AEGILIATGS EVELALAAQA KLAEQGHHVR VVSMPCMNIF AAQDAAYQER 
VLPSSITKRV AIEAGTTGLW YRYVGLHGAV IGIDHFGASA PAPVLFEKFG FTADNVVAHF 
QAL