Gene AFE_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3250 
Symbolpgk 
ID7136038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2926461 
End bp2927666 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID643531593 
Productphosphoglycerate kinase 
Protein accessionYP_002427603 
Protein GI218666615 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.397382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTCC TGCGTATGAT GGATGTGCCA TTAAAGGGCA AACGGGTGCT GATTCGTGAG 
GACCTCAACG TCCCCATGAA TGATGCGGGG GCTATCACCG ATGACACCCG CATCCGCGCC
AGCCTGCCCA CCATTCGCGC CGCGCTGGCC AGCGGCGCAC GGGTGATGCT GATGTCCCAT
CTGGGGCGTC CCAAGGAAGG CGTTTTCGAC GAAAAGGCCA GCCTCGCTCC GGTCGCCGCC
CACCTCAGCC AGTTGCTGGG CCGCGATGTG CCGTTGGTAC GGGACTGGCT GGATGCCGGT
AAGGATCGCC TTGCGCAGCT TCAGGATGGC GATGTCGTCG TGCTGGAAAA CGTGCGTTTC
AATACTGGCG AAAGCAAGGA CGACGAGGCG CTGTCCAAAA AGATGGCTGC CCTCTGTGAC
GTGTTTGTGA TGGACGCCTT CGGTACCGCC CATCGCGCCC AGGCCAGCAC CCACGGGGTC
GGCAAGTTCG CTCCCGTCGC CTGCGCCGGT CCGCTGCTGG TCAATGAGCT GGACGCGCTG
GGCAAGGCCC TGCAGAACCC CCGGCGTCCT CTGGTCGCCA TTGTCGCCGG GTCCAAGGTG
TCCACCAAGC TGACCATCCT GAAGTCCCTG GCAGACAAGG TGGATCAACT GGTGGTGGGT
GGTGGCATCG CCAACACCTT CATCCTCGCC GCAGGTCATT CTGTCGGCAA ATCCCTCTGT
GAAGCGGATC TGGTGCCTGA TGCCCAAGCC ATCATCGCCG CAGCCAGGGC CAAGGGCGGC
GATGTCCCGC TGCCCAGCGA CGTGGTGGTC GCCAAGGCAT TTTCCGAGAC GGCCCCGGCG
CGAACCTGCA GGGTGGATGA TATCGCTGCC GATGACATGG TGCTCGATAT CGGTCCCGAC
ACCGCCAAAA CGCTGGGCGA TATCCTGCGC AAGGCGGGTA CCATCGTCTG GAATGGCCCG
GTGGGCGTAT TTGAGTTTGA CGCCTTCGCC GGCGGCACCG AGGCCATTGC TCGGGCGGTG
GCGGAAAGCA GCGCCTTTTC CATTGCCGGG GGGGGGGACA CCATTGCGGC GATCAACAAA
TTCCATATCG AAGATAAGGT CTCCTACATC AGTACGGGTG GGGGTGCCTT TCTGGAATTT
CTCGAAGGCA AGACCCTGCC CGCCGTAGCC ATGCTGGAAG AACGTGCACG AGGTACACAC
ACTTGA
 
Protein sequence
MNVLRMMDVP LKGKRVLIRE DLNVPMNDAG AITDDTRIRA SLPTIRAALA SGARVMLMSH 
LGRPKEGVFD EKASLAPVAA HLSQLLGRDV PLVRDWLDAG KDRLAQLQDG DVVVLENVRF
NTGESKDDEA LSKKMAALCD VFVMDAFGTA HRAQASTHGV GKFAPVACAG PLLVNELDAL
GKALQNPRRP LVAIVAGSKV STKLTILKSL ADKVDQLVVG GGIANTFILA AGHSVGKSLC
EADLVPDAQA IIAAARAKGG DVPLPSDVVV AKAFSETAPA RTCRVDDIAA DDMVLDIGPD
TAKTLGDILR KAGTIVWNGP VGVFEFDAFA GGTEAIARAV AESSAFSIAG GGDTIAAINK
FHIEDKVSYI STGGGAFLEF LEGKTLPAVA MLEERARGTH T