Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3242 |
Symbol | trpC |
ID | 7135981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2918441 |
End bp | 2919232 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643531585 |
Product | indole-3-glycerol phosphate synthase |
Protein accession | YP_002427595 |
Protein GI | 218667332 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.857016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGACA TACTTCAGGA AATCATTGCC CATAAGCGGG AGGAGCTGGT GGAGCGCCAA ACCCGTCTGG GCCTTGCGGA GCTGCAGGCG GCAGTGGCCC TGACGGCACC GCCGCGCAAC TTCGTCGGCG CCGTTCGCGC CAGAATGGCC CAGGGACAGC CCGCAGTGAT CGCCGAAATC AAAAAGGCAT CGCCGTCGGC GGGGGTAATC CGCGAAGACT TCAATCCGGT GACCATTGCC CAAGACTACG CCGCCCATGG CGCAGCCTGC CTGTCGGTTC TGACCGATGA ACACTATTTT CAGGGCGCCG ACCTCTATCT CGCCGCCGCC CGTGAGGCCT GCCCACTGCC CGTGCTACGC AAGGATTTCT GCATCGATCC CTATCAGGTC TGGGAAGCAC GGGCCATTGG GGCCGACGCC ATCCTGCTCA TCGTTGCGGC CCTGAGCGAT GCCGAGCTGC AGAGTCTGGA GGCAACGGCG CAGAGCCTGG ATCTGGCGGT GCTGGTGGAG GTGCATGATG CAGCCGAGTT ACAGCGCGCA CTAAAATTGC GTACCCCACT GATCGGCATC AATAACCGGG ATCTGCGGCG TTTTGTCACC GAAATTGAAA CCACGCTGAA ACTGCTCCCC GAGATTCCCC GAGAGCGGAT CGTCGTCACC GAAAGCGGCA TCCGCAGCCG GGAGGAGGTG GCCACCCTGC GCGCCGCGGG AGTCGGTGCC TTTCTCGTGG GCGAGGCATT TATGCGCACC GCCCAGCCGG GAGACGCCCT GCAACACCTG TTTTTTGACT AA
|
Protein sequence | MTDILQEIIA HKREELVERQ TRLGLAELQA AVALTAPPRN FVGAVRARMA QGQPAVIAEI KKASPSAGVI REDFNPVTIA QDYAAHGAAC LSVLTDEHYF QGADLYLAAA REACPLPVLR KDFCIDPYQV WEARAIGADA ILLIVAALSD AELQSLEATA QSLDLAVLVE VHDAAELQRA LKLRTPLIGI NNRDLRRFVT EIETTLKLLP EIPRERIVVT ESGIRSREEV ATLRAAGVGA FLVGEAFMRT AQPGDALQHL FFD
|
| |