Gene AFE_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3240 
Symbol 
ID7135258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2917446 
End bp2917973 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content61% 
IMG OID643531583 
ProductRrf2 family protein 
Protein accessionYP_002427593 
Protein GI218665081 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000396914 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGA GATTCGAGAA GAATGCTGAG GATGCCTCCA TGCTACTGAG TAAAACCAGC 
GAATACGCCT TACAGGCCCT GATCTACCTC GCGGCACAGC CATCCGGGGA GCCGGTGCTG
AGTCGGGACA TATCCGATTA TCTACACGTC CCCGCCCAGT ATCTGGCGAA GATCCTGCAG
GATCTGGCCA AGCGCGGGGT GCTCGATTCC TTCAAGGGCC GCGGCGGCGG CTTTGTCCTG
CGCCCCGGAG CAGGACAGAT GAACATCCTC GACATCATCG AGATCGTGGA AGGACAGCCG
TTTGGTCAGG GCTGCGTACT CGGCCTCAAG GCCTGCGCGG ATGAAACCGC CTGCCCCGTG
CATACCCAGT GGAAGCCGCT CAAGGCGGAG GTAATCGACC TGCTCGGCAG GCAGACCATC
GCCAGCATGG CCGAGGCCGT AATGGCCGGT CGTTATCGCA TCCACTTGGC GGGTGGGGCC
CAACTGCATA TCCGCCCGGC GCCGACATCC GGCAATGGTT TTTCCTGA
 
Protein sequence
MTMRFEKNAE DASMLLSKTS EYALQALIYL AAQPSGEPVL SRDISDYLHV PAQYLAKILQ 
DLAKRGVLDS FKGRGGGFVL RPGAGQMNIL DIIEIVEGQP FGQGCVLGLK ACADETACPV
HTQWKPLKAE VIDLLGRQTI ASMAEAVMAG RYRIHLAGGA QLHIRPAPTS GNGFS