Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3224 |
Symbol | |
ID | 7135472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2904706 |
End bp | 2905578 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643531569 |
Product | pirin family protein |
Protein accession | YP_002427580 |
Protein GI | 218666960 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAACA TCGGTTTGCC ATCGGAATCC GTCCGTCGCT CGAGGACGAT TGAGCGTATC GTGGCGGGAC AGGCCACCTC TGACGGCGCG GGCGTTCAAT TAACCCGGGT TTTAAACCAA TCCTTGCAGC ACCGGCTGGA TCCCTTTCTG ATGCTCGACG CTTTCGGTAG CGACGATCCA GGTGACTACA TTGCCGGGTT TCCCGATCAT CCGCACCGCG GCTTCGAGAC CATCACGTAT ATGATATCGG GCAAAATGCG TCATCGTGAC AGTGCGGGAC ACGAAGGGTT GCTCGAAAGC GGAGGCGTGC AATGGATGAC CGCAGGGCGA GGCGTGATTC ACTCGGAAAT TCCGGAACAG GAAAAAGGCG TCATGGAGGG ATTTCAGCTC TGGCTCAACC TGCCGAGCCA GGACAAGATG GCACCGCCGT GGTATCGCGA TTTCTCTGCC GCAGATTTAC CGCGCTTTGT GACTCAGGAA GGAGTCGTCG TCACGGTAAT TGCCGGAGAG AGTCATGGAG TCACTGGCGC GGTAACGCGG GAGAGCACAA ATCCACTCTA TCTGGACCTG CAATTGCCGG AAGGCGCACA TTTCAAACAG CAACTGCCGG CTGATTACAA CGCCTTTCTT TATGCATATC GCGGAACCCT GGAAATCGTC GGCACACCTG TGTCTGTCCA GCGCATGGCC ATACTCGAGA ATGGCCCGGA AACCGACGGT GTGGACATCA AGGCGCTTAC GAGTGCACGC TTACTGCTGA TTGCGGGCCA GCCGTTGCAT GAGCCAATTG TCCAGTATGG ACCATTTGTC ATGAATACTC GGGAGGAAAT ATACCAGGCT TTTGAGGATA TGAAGGAAGG CCGGTTAGTC TAA
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Protein sequence | MENIGLPSES VRRSRTIERI VAGQATSDGA GVQLTRVLNQ SLQHRLDPFL MLDAFGSDDP GDYIAGFPDH PHRGFETITY MISGKMRHRD SAGHEGLLES GGVQWMTAGR GVIHSEIPEQ EKGVMEGFQL WLNLPSQDKM APPWYRDFSA ADLPRFVTQE GVVVTVIAGE SHGVTGAVTR ESTNPLYLDL QLPEGAHFKQ QLPADYNAFL YAYRGTLEIV GTPVSVQRMA ILENGPETDG VDIKALTSAR LLLIAGQPLH EPIVQYGPFV MNTREEIYQA FEDMKEGRLV
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