Gene AFE_3206 details

Gene Information

• Locus tag: AFE_3206
• Symbol: atpH
• ID: 7135057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2890468
• End bp: 2891007
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643531551
• Product: ATP synthase F1, delta subunit
• Protein accession: YP_002427562
• Protein GI: 218668130
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.496834
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGATC TGATCACCGT GGCGCGCCCC TACGCAGAGG CGCTTTATGG GCTGGCGAAA 
GAGAGCGGCC AGGAACAGGC CTGGGCGGAT GCACTGCAGG CGCTTGCCGC CATGATCGCC 
GATGTTCAGG CGCAGGCCTT TCTCACCGAT CCGGAGCGTG CTGACGCCGA AAAGGTGTCC 
TTGTTGAGTG CGGTTCCTGT GGCGGTGGAC GTCAAGGCGT GGAAGGCATT CCTGGCGCTG 
TTGATCCACA ACGATCGCTG GCCCGCTACG GCCGAGATCG GCACACTTTT CGCGGACGCC 
ATGCGCCGTG CAGAAGGCGT TGTCGATGTC CTGGTCACCA GCGCCATCGC CCTGGACGCC 
GGGCAGAAGA CGGCTGTGCA GTCCGCGCTC GAGCGCCGCT TTGCCGGCCA CAAGGTGGCA 
TTCCGGGAAG CGGTCGATGC CGCGCTGATC GGTGGCCTAG TTATTCATAC GGGTGATCTC 
ACCATAGATG CTTCCGTGCG TGGACAAGTG CAGCAGCTTG CCCGAACCCT TCGCAGCTAA 

 

Protein sequence

MADLITVARP YAEALYGLAK ESGQEQAWAD ALQALAAMIA DVQAQAFLTD PERADAEKVS 
LLSAVPVAVD VKAWKAFLAL LIHNDRWPAT AEIGTLFADA MRRAEGVVDV LVTSAIALDA 
GQKTAVQSAL ERRFAGHKVA FREAVDAALI GGLVIHTGDL TIDASVRGQV QQLARTLRS