Gene AFE_3202 details

Gene Information

• Locus tag: AFE_3202
• Symbol: atpC
• ID: 7134305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2886151
• End bp: 2886576
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643531547
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002427558
• Protein GI: 218666899
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.447549
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATGA CCATAGATGT GCGGGTAGTC AGCGCCGAGG GCAGCATCTA CGCGGGGGTC 
GCCGATATGG TGGTGGCCCC CGGCGAGATG GGCGAACTTG GCATTCTGCC CCGCCACGCG 
CCGTTGCTGA CCGGGTTGCG CCCCGGTGAG TTGCGGATCA TTCACGGTGC GGAGACGGAA 
TATCTCTTCG TCAATGGCGG GATTCTGGAA ATTCAACCCG ACATGGTGAC GGTGCTGGCT 
GACTCGGCGG AACGCGCGAC CGATATCGAC GAAGCCAAGG CTTTAGCGGC CAAGCAGGCT 
GCTGAAGCTC GGATGGCGGG ACACACGGAC CAGATGGAGT ATGCGGCGGC TCAGGCGGAA 
TTGCTGGAGC AGATTGCCCG CCTGAAGACA GTGCAACGCC TGCGGGAGCA GGGATTGCTG 
CGCTGA 

 

Protein sequence

MAMTIDVRVV SAEGSIYAGV ADMVVAPGEM GELGILPRHA PLLTGLRPGE LRIIHGAETE 
YLFVNGGILE IQPDMVTVLA DSAERATDID EAKALAAKQA AEARMAGHTD QMEYAAAQAE 
LLEQIARLKT VQRLREQGLL R