Gene AFE_3200 details

Gene Information

• Locus tag: AFE_3200
• Symbol: glmS
• ID: 7134085
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2882774
• End bp: 2884609
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643531545
• Product: glucosamine--fructose-6-phosphate aminotransferase, isomerizing
• Protein accession: YP_002427556
• Protein GI: 218668085
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGTA TTGTCGGTGG GGTGAGTAAA ACAGATCTGG TCCCGATGAT TCTGGAGGGG 
TTGCAGCGCC TGGAGTATCG TGGCTACGAC TCTGCCGGGC TGGCGATATT GGGGGCCGAT 
GCGGATTTGC TGCGGGTGCG CAGCGTCGGG CGGGTCGCCG AGCTGACCGC CGCCGTTGTC 
GAGCGTGGCT TGCAGGGTCA GGTGGGCATC GGCCACACGC GCTGGGCCAC CCATGGCGGC 
GTCGCCGAAT GCAATGCGCA TCCCATGATC TCCCATGAAC AGATCGCTGT GGTCCATAAC 
GGCATCATCG AGAACTTTCA TGCCTTGCGC GCCCACCTGG AAGCAGCGGG GTACACCTTC 
ACCTCCGAGA CCGATACGGA GGTCATCGCG CATCTGGTGC ACCATTATCG GCAGACCGCG 
CCGGACCTGT TCGCGGCGAC CCGCCGGGCA GTGGGCGATC TGCGCGGCGC CTATGCCATT 
GCGGTGATCT CCAGCGGCGA TCCGGAGACC GTGTGCGTGG CACGGATGGG CTGCCCGCTG 
CTGCTGGGCG TTGCCGATGA TGGGCATTAC TTCGCCTCGG ACGTGGCGGC CCTGCTGCCG 
GTGACCCGCC GCGTGTTGTA TCTCGAAGAC GGCGATGTGG CCATGCTGCA GCGGCAGACC 
CTGCGGATTA CGGATCAGGC CGGAGCGTCG CGGCAGCGGG AAGAACACTG GAGCCAGCTC 
AGTGCGGCGG CTGTCGATCT GGGGCCTTAC CGCCACTTCA TGCAGAAGGA AATCCACGAA 
CAGCCCCGCG CGGTTGCCGA TACCCTGGAA GGTGCGCTGA ACAGTCAACT GGATCTGACA 
GATCTCTGGG GAGACGGTGC CGCGGCTATG TTTCGCGATG TGGACCGGGT GCTGTTCCTG 
GCCTCCGGCA CTAGCCACTA CGCGACATTG GTGGGACGCC AATGGGTGGA AAGCATTGTG 
GGGATTCCGG CGCAGGCCGA GCTGGGGCAC GAATATCGCT ACCGGGACTC CATCCCCGAC 
CCGCGCCAGT TGGTGGTGAC CCTTTCGCAA TCCGGCGAAA CGCTGGATAC TTTCGAGGCC 
TTGCGCCGCG CCAAGGATCT CGGTCATACC CGCACGCTGG CCATCTGCAA TGTTGCGGAG 
AGCGCCATTC CGCGGGCGTC GGCGTTGCGC TTCCTGACCC GGGCCGGCCC AGAGATCGGA 
GTGGCCTCGA CCAAGGCGTT CACCACCCAG TTGGCGGCGC TCTATCTGCT GGCTCTGTCC 
CTGGCCAAGG CGCAGGGGCA TCTGAACGAT GTGCAGCAGG CGGATCACCT GGACGCCTTG 
CGGCAACTGC CGGGCAGTGT CCAGCATGCC CTGAACCTGG AGCCGCAGAT TCAGGGTTGG 
GCGGCACGTT TTGCCAGCAA GGACCATGCG CTTTTTCTGG GGCGCGGCCT GCACTACCCC 
ATTGCGCTGG AGGGCGCGCT GAAGCTCAAG GAAATCTCCT ATATCCACGC CGAGGCTTAT 
CCCGCGGGCG AATTGAAGCA TGGCCCCTTG GCCCTGGTGG ACCGCGACAT GCCCGTGGTG 
GTGATCGCGC CCAATGACCG CCTCCTCGAA AAGCTGGCCG CCAACATGCA GGAAGTCCAC 
GCCCGTGGCG GTGAGCTCTA TGTTTTTGCC GATTCGGACA GCCACTTTAA CGCCAGTGAG 
GGCGTGCATG TGATGCGTTT GCCCCGTCAC GCCGGTCTGC TCTCCCCCAT CGTCCATGCT 
ATCCCGGTGC AGTTGCTGGC CTATCATGCG GCGCTGGTGA AGGGCACCGA TGTGGATCGA 
CCGCGTAACC TCGCGAAGAG CGTGACGGTG GAGTAA 

 

Protein sequence

MCGIVGGVSK TDLVPMILEG LQRLEYRGYD SAGLAILGAD ADLLRVRSVG RVAELTAAVV 
ERGLQGQVGI GHTRWATHGG VAECNAHPMI SHEQIAVVHN GIIENFHALR AHLEAAGYTF 
TSETDTEVIA HLVHHYRQTA PDLFAATRRA VGDLRGAYAI AVISSGDPET VCVARMGCPL 
LLGVADDGHY FASDVAALLP VTRRVLYLED GDVAMLQRQT LRITDQAGAS RQREEHWSQL 
SAAAVDLGPY RHFMQKEIHE QPRAVADTLE GALNSQLDLT DLWGDGAAAM FRDVDRVLFL 
ASGTSHYATL VGRQWVESIV GIPAQAELGH EYRYRDSIPD PRQLVVTLSQ SGETLDTFEA 
LRRAKDLGHT RTLAICNVAE SAIPRASALR FLTRAGPEIG VASTKAFTTQ LAALYLLALS 
LAKAQGHLND VQQADHLDAL RQLPGSVQHA LNLEPQIQGW AARFASKDHA LFLGRGLHYP 
IALEGALKLK EISYIHAEAY PAGELKHGPL ALVDRDMPVV VIAPNDRLLE KLAANMQEVH 
ARGGELYVFA DSDSHFNASE GVHVMRLPRH AGLLSPIVHA IPVQLLAYHA ALVKGTDVDR 
PRNLAKSVTV E