Gene AFE_3194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3194 
Symbol 
ID7136762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2873220 
End bp2874431 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content56% 
IMG OID643531539 
ProductATP-dependent DNA helicase RecG domain protein 
Protein accessionYP_002427550 
Protein GI218667481 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.404765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA CCTACACCGA ACTGCTAGAA ATCATCCGCA ACGGCGAGAA TTCAGGCGTT 
GAATTCAAGC GTGACGATAT TCAGAACCAT GACTTGGCAA AGGAACTCGT CGCCTTGACC
AATTTCGAAG GCGGGATCGT CCTGTTGGGG GTTGAGGATG ACGGTAGCAT CAGCGGTATC
ACACGGCAGA AACTTGAAGA GTGGGTAATG ACTGCCTGCC GGGACAAAAT ACGACCTGGC
CTTATTCCGT TCTACGAGCA GATTAGGGAC GTTGAGCCAG GAAAAGATGT CGCTATCGTG
CGCGTTTCAC GTGGTCTCGA TGTTCATACC CTATGGCACA ACAATAAGAA CAGCTATTTC
ATCAGGGTGG GGACTCAGAG TCGCGAGCCG ACCCCGGAAG AGCTCGGTCG GCTGTTCCAG
CAGCGTGGTA GCTTCCGAGC TGAGCTGCGA CCAGTATCCG GCGCAACACT CGCCGACCTG
GACATGCGGC GCCTATCGAA TTACTTCGCT CAGGTGAGGG AGCAGGTCGT GCCGGAAAAC
AATGATGAAG CCGCGTGGAG GGCCCTTCTG TTCAACACCG AGATCATGGT CGAGGACGGC
ATCACTGTTT CAGGCATTCT TCTGTTCGGT AGGACACCCA ATCGATTCCT GCCTCAAGCT
GGTATCGACG CCGTTGCCTT TCCGGGCGTA GATAAGGACT ATGCCGCCCG TGAAAGGGCC
GCCTTGCGGG GGCCGATGAC TCCGCTGCTA AACGACGCAG GCGATATCGT CGAAGCTGGC
TTGGTCGAGC AAGCCATCGC CTTCGTCCAG CGCAACACTG CTATCGGAGG GCAACTTGAA
GAAGGCGGTG CGCGCCGCGA GAACCTCCCA GCTTATCCCC GCGAGGCCAT CCGCGAAGCG
ATCGTCAACG CCCTGATTCA TCGAGACTAT CTGCTCTCAA GCACTGACAT TGAGCTTTCG
ATCTATGAGG ACCGACTAGA AATTACTTCC CCAGGCAGAT TGCCAAATGG TATTACGCCG
GCGCGGATGC TGACCGGCTG CCGTGCGACA CGAAACCAGC TCATCAAGGA TGTTATGCGC
GACTACCGCT ACCTCGAACA TTCCGGCATG GGCGTCCCAC GCAAGATCGT TAAGTGCATG
AGGGAACACA ATGGCACCGA GCCTCAGCTA ATTGAGGATG GAGAGCTTTT CACGGTCCGC
CTTCTTCGGT AA
 
Protein sequence
MTMTYTELLE IIRNGENSGV EFKRDDIQNH DLAKELVALT NFEGGIVLLG VEDDGSISGI 
TRQKLEEWVM TACRDKIRPG LIPFYEQIRD VEPGKDVAIV RVSRGLDVHT LWHNNKNSYF
IRVGTQSREP TPEELGRLFQ QRGSFRAELR PVSGATLADL DMRRLSNYFA QVREQVVPEN
NDEAAWRALL FNTEIMVEDG ITVSGILLFG RTPNRFLPQA GIDAVAFPGV DKDYAARERA
ALRGPMTPLL NDAGDIVEAG LVEQAIAFVQ RNTAIGGQLE EGGARRENLP AYPREAIREA
IVNALIHRDY LLSSTDIELS IYEDRLEITS PGRLPNGITP ARMLTGCRAT RNQLIKDVMR
DYRYLEHSGM GVPRKIVKCM REHNGTEPQL IEDGELFTVR LLR