Gene AFE_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3176 
Symbol 
ID7135219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2853973 
End bp2854800 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID643531525 
ProductISAfe9, transposition helper protein 
Protein accessionYP_002427536 
Protein GI218667625 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGA GCACGCTCGC CCGACTTCCC ATGATGCTCA CCGATCTGCG CTTGCCAACC 
ATGAAACAGG CTTGGCAAGG CCTCGCCACA AAGTCCAATC AGGAAGACTG GCCCGCCGAG
CGCTTCCTGG CGACCCTTCT GGAACAGGAA ATCCTGGGGC GGGAGGCACG GCGTTTGGAA
CGTCGTCGCC AGGAATCCAA CCTGCCACCG GATAAGCGGC TGGGAAACTA TGACTTCACG
GTGGTTCCCA CGCTCTCCAA AGCCCATGTG CAAGCCTTGG CCGAGGCGGA TGGATGGATC
CAGGAAGGGG CCAACCTGCT GCTCTTCGGC CCGCCTGGTG TCGGCAAAAG CCATTTGGTG
GCCGCTGTGG GGCATGCCCT AGTGGAACGG GGGTGTCGGG TATACTTCAC ACGGACCAGC
GATTTGGTTC AGCAGTTACA ATCCGCGCGC AAGGAGCTCC GATTGCCGGC CACTCTGGCC
AAGCTGGACC GCTTTGACCT ACTGATTTTG GATGACTTCA GCTATGTTCG CCGGGATCAG
GCCGAGACCT CGGTGCTCTT CGAACTGATC TCGGAACGCT ATGAACGGAA AAGTCTGGCC
ATCACAGCCA ATCAACCCTT CTCTGCATGG GATCAGGTCT TCCCGGAGGC TGCCATGACC
GTGGCCGCCG TGGATCGTCT GGTCCACCGC TCCACCATCT TGGAGCTCCA TGCAGAAAGC
TACCGGCGCC GGACGGCCAA GAATCGCGCA AACGTCACCG TGACAACCAA GGAGGTAAAG
CGCGACCTGG AAGAAACGGA CTCACAGGAT GGTGTAGTAT CACAGTAA
 
Protein sequence
MNPSTLARLP MMLTDLRLPT MKQAWQGLAT KSNQEDWPAE RFLATLLEQE ILGREARRLE 
RRRQESNLPP DKRLGNYDFT VVPTLSKAHV QALAEADGWI QEGANLLLFG PPGVGKSHLV
AAVGHALVER GCRVYFTRTS DLVQQLQSAR KELRLPATLA KLDRFDLLIL DDFSYVRRDQ
AETSVLFELI SERYERKSLA ITANQPFSAW DQVFPEAAMT VAAVDRLVHR STILELHAES
YRRRTAKNRA NVTVTTKEVK RDLEETDSQD GVVSQ