Gene AFE_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3168 
Symbol 
ID7134713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2848227 
End bp2848874 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content57% 
IMG OID643531518 
Producthypothetical protein 
Protein accessionYP_002427529 
Protein GI218665761 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG CAAAATTCGA TACCCAGCCG TTACCGCACT TCCTGATGGA AAGTGCCACC 
GTAGATTATG CGCATGCCGA TATCCGTAAG TTGGCGGCCG CCTTATCCTC TGACGATTCA
ACGGCAACCG CCAGGCGTTG CTTCGAATGG GTACGCGATC ACATCGAACA CAGCATGGAT
TTTCACCGGG AAGAAGTGAC CTGCGCAGCG TCGGATGTGT TGCAGCAAGG CACTGGCCTA
TGCACCGCGA AAAGTCATCT GCTCGTGGCC TTATGGCGCG CCAACCAAAT CCCTGCGGGA
TTCTGTTATC AACGACTGAC GCTGGATGGC CCCAATCCGC CCTACTGTAC ACACGGCTTC
ACCGCGGTCT GGCTGGATGA CCGGGGCTGG TACCGTTGTG ATGCGCGCGG CAACAGCAAA
CCCGGGATCC GCTGCGAATT CACGCCCGGA CAAGAAAATC TTGCTTTCTC GTCGAGGTAT
GACGGCGAGC GGACCTATCC GGAGGTTTGG GCAGAGCCCT GGCCAGATTT GCTCACCGCC
ATGGAAAAAC TGCAAAACAT ATCGCAGTAT CGGAGCCATC CCATTGATGC CCGCCCACCC
GCCGCAGATT TGTGCGTAAG TGAGTCTGCA GCGCCGAACA TGGAATGA
 
Protein sequence
MKLAKFDTQP LPHFLMESAT VDYAHADIRK LAAALSSDDS TATARRCFEW VRDHIEHSMD 
FHREEVTCAA SDVLQQGTGL CTAKSHLLVA LWRANQIPAG FCYQRLTLDG PNPPYCTHGF
TAVWLDDRGW YRCDARGNSK PGIRCEFTPG QENLAFSSRY DGERTYPEVW AEPWPDLLTA
MEKLQNISQY RSHPIDARPP AADLCVSESA APNME