Gene AFE_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3163 
Symbol 
ID7137031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2844650 
End bp2844970 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content46% 
IMG OID643531514 
Productisochorismate-pyruvate lyase 
Protein accessionYP_002427525 
Protein GI218666804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01803] chorismate mutase related enzymes 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG AAAGGCAAGT AGAGCCGGAA GCCTGTTCCG GAATGGACGA CGTCCGCCGA 
GAGATAGACC GCATTGACCG TGCAATCATT GCAATGCTCG GGAAACGATT CAAATATGTT
ATTGAGGCAT CAAAGTTTAA AACATCCGAA ATGTCGGTCC GTTCACCCGA TCGCTTTAAG
GCCATGCTTG AGATGCGCCG TGAATGGGCG CAATTAGAAG GCCTGAATCC GGATGCAATC
GCAAAGATGT ACAGTGATTT GGTGAACCAC TTTATCGAAG AGGAGATGAA ACAATGGGAG
ATTCATCAAC GAACGATATA G
 
Protein sequence
MNIERQVEPE ACSGMDDVRR EIDRIDRAII AMLGKRFKYV IEASKFKTSE MSVRSPDRFK 
AMLEMRREWA QLEGLNPDAI AKMYSDLVNH FIEEEMKQWE IHQRTI