Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3161 |
Symbol | |
ID | 7136874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2842362 |
End bp | 2843357 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643531512 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
Protein accession | YP_002427523 |
Protein GI | 218665593 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0658558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTGTC TGGTGACCAG TGCTCGCCCT TACGATGAAC AATTCCTCAG CGCCGCCAAC CATGGACGCC ACGAATTGGT ATTTGTTGAA ACCGCACTGA GCGCGGATAC GGCTTTTATT GCCCAGGGAT ACCCTGCCAT TTGCCCCTTC GTGGATGACA CGCTGGACGC AAAAACACTG GAAACCATAG CGCGCTTGGG GACTAAACTA CTGGTCTTGC GCAGCACCGG GTTCAATCAT GTGGACATGC CTGCGGCCGA GAAGTACGGC ATCACCGTCA TGCGGGTACG CGATTATTCC CCTTATGCGG TGGCTGAATA TGCCGTCGGC CTGATGTTGA CCCTGAACCG ACACCTGCAT AAAGCCTATA ACCGGGTGCG TGACGGTAAT TTTCTCCTCG ACGGCTTGCT GGGTTTTGAC ATGCATGGCA AAACCGTAGG CATTATCGGC ACTGGAAAAA TTGGCCAGGC ACTCGCCCGG ATTCTGCATG GTATGGGCTG CCACTTGTTG GGCTACGACA CAGTCGCCAA TCCCGCGTGC CTGGAACTCG GCGTTGCATA TGTACCGCTG GAAGAATTGC TCGTCAAAAG CCAAATCGTC AGCCTCCATG TGCCGCTGCT CCCGGAAACC CGGCATCTGA TGAATGCGGA ACGGTTCGCC TTGATGCCGG ACGGTGCCAT GCTGATCAAT ACCAGCCGTG GTCCGCTCAT CGACACCACG GCACTCATTG CGGCACTGAA AAGCCGCCAT CTGGGTGCTG TGGGTCTGGA TGTCTATGAA GAAGAGGCAG AATTATATTT TAAGGATCAT TGCGATGACA TTATCTGCGA TGACAGCTTC GAACGGCTGC TCACTTTTCC CAATGTCATC ATCACGGGCC ATCAGGCCTT TTTTACCAGT GAGGCACTGA CCACCATTGC CAGGACCACG ATCCAGAACC TGGATGACTA CAGCGATGGA AAGGATAATC CCAATTGCGT TCGCAGCAAG GGATGA
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Protein sequence | MRCLVTSARP YDEQFLSAAN HGRHELVFVE TALSADTAFI AQGYPAICPF VDDTLDAKTL ETIARLGTKL LVLRSTGFNH VDMPAAEKYG ITVMRVRDYS PYAVAEYAVG LMLTLNRHLH KAYNRVRDGN FLLDGLLGFD MHGKTVGIIG TGKIGQALAR ILHGMGCHLL GYDTVANPAC LELGVAYVPL EELLVKSQIV SLHVPLLPET RHLMNAERFA LMPDGAMLIN TSRGPLIDTT ALIAALKSRH LGAVGLDVYE EEAELYFKDH CDDIICDDSF ERLLTFPNVI ITGHQAFFTS EALTTIARTT IQNLDDYSDG KDNPNCVRSK G
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