Gene AFE_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3161 
Symbol 
ID7136874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2842362 
End bp2843357 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content54% 
IMG OID643531512 
ProductD-isomer specific 2-hydroxyacid dehydrogenase family protein 
Protein accessionYP_002427523 
Protein GI218665593 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0658558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGTC TGGTGACCAG TGCTCGCCCT TACGATGAAC AATTCCTCAG CGCCGCCAAC 
CATGGACGCC ACGAATTGGT ATTTGTTGAA ACCGCACTGA GCGCGGATAC GGCTTTTATT
GCCCAGGGAT ACCCTGCCAT TTGCCCCTTC GTGGATGACA CGCTGGACGC AAAAACACTG
GAAACCATAG CGCGCTTGGG GACTAAACTA CTGGTCTTGC GCAGCACCGG GTTCAATCAT
GTGGACATGC CTGCGGCCGA GAAGTACGGC ATCACCGTCA TGCGGGTACG CGATTATTCC
CCTTATGCGG TGGCTGAATA TGCCGTCGGC CTGATGTTGA CCCTGAACCG ACACCTGCAT
AAAGCCTATA ACCGGGTGCG TGACGGTAAT TTTCTCCTCG ACGGCTTGCT GGGTTTTGAC
ATGCATGGCA AAACCGTAGG CATTATCGGC ACTGGAAAAA TTGGCCAGGC ACTCGCCCGG
ATTCTGCATG GTATGGGCTG CCACTTGTTG GGCTACGACA CAGTCGCCAA TCCCGCGTGC
CTGGAACTCG GCGTTGCATA TGTACCGCTG GAAGAATTGC TCGTCAAAAG CCAAATCGTC
AGCCTCCATG TGCCGCTGCT CCCGGAAACC CGGCATCTGA TGAATGCGGA ACGGTTCGCC
TTGATGCCGG ACGGTGCCAT GCTGATCAAT ACCAGCCGTG GTCCGCTCAT CGACACCACG
GCACTCATTG CGGCACTGAA AAGCCGCCAT CTGGGTGCTG TGGGTCTGGA TGTCTATGAA
GAAGAGGCAG AATTATATTT TAAGGATCAT TGCGATGACA TTATCTGCGA TGACAGCTTC
GAACGGCTGC TCACTTTTCC CAATGTCATC ATCACGGGCC ATCAGGCCTT TTTTACCAGT
GAGGCACTGA CCACCATTGC CAGGACCACG ATCCAGAACC TGGATGACTA CAGCGATGGA
AAGGATAATC CCAATTGCGT TCGCAGCAAG GGATGA
 
Protein sequence
MRCLVTSARP YDEQFLSAAN HGRHELVFVE TALSADTAFI AQGYPAICPF VDDTLDAKTL 
ETIARLGTKL LVLRSTGFNH VDMPAAEKYG ITVMRVRDYS PYAVAEYAVG LMLTLNRHLH
KAYNRVRDGN FLLDGLLGFD MHGKTVGIIG TGKIGQALAR ILHGMGCHLL GYDTVANPAC
LELGVAYVPL EELLVKSQIV SLHVPLLPET RHLMNAERFA LMPDGAMLIN TSRGPLIDTT
ALIAALKSRH LGAVGLDVYE EEAELYFKDH CDDIICDDSF ERLLTFPNVI ITGHQAFFTS
EALTTIARTT IQNLDDYSDG KDNPNCVRSK G