Gene AFE_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3152 
Symbolcyc1 
ID7135079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2833974 
End bp2834666 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID643531503 
Productcytochrome c552 
Protein accessionYP_002427514 
Protein GI218667078 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.720354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT ACTTAAGCCA AGACCGGTTG CGCAATAAAG AGAACGACAC GATGACCCAT 
CCACATAGCA AGATGTATAA GTCGAAAACC TTCCTCCTGT TCAGCGCACT CCTGCTGGTG 
GCCGGGCAGG CGAGTGCTGC CGTCGGCAGC GCCGACGCGC CGGCGCCATA CCGCGTTTCC 
AGCGATTGTA TGGTGTGCCA CGGGATGACT GGCCGTGACA CACTTTACCC GATCGTCCCC 
CGCTTGGCCG GACAGCATAA AAGTTATCTG GAGGCGCAGT TGAAAGCGTA TAAGGACCAC 
TCCCGTGCCG ATCAGAATGG CGAAATCTAC ATGTGGCCCG TGGCACAAGC GCTGGACAGT 
GCGAAAATCA CGGCGCTGGC GGATTACTTC AACGCCCAGA AGCCGCCGAT GCAAAGCAGC 
GGCATCAAGC ATGCCGGTGT GAAAGAAGGA AAGGCCATAT TCAACCAAGG GGTTACCAAC 
GAACAAATCC CTGCCTGCAT GGAATGCCAC GGATCGGCTG GCCAAGGAGC GGGCCCGTTC 
CCCCGCTTGG CGGGCCAGCG TTACGGTTAC ATCATTCAGC AGTTGACCTA CTTCCACAAC 
GGCACACGGG TTAATACCCT GATGAATCAG ATTGCGAAGA ATATCACCGT GGCGCAGATG 
AAGGATGTGG CGGCTTATCT TTCATCGTTG TAA
 
Protein sequence
MTTYLSQDRL RNKENDTMTH PHSKMYKSKT FLLFSALLLV AGQASAAVGS ADAPAPYRVS 
SDCMVCHGMT GRDTLYPIVP RLAGQHKSYL EAQLKAYKDH SRADQNGEIY MWPVAQALDS 
AKITALADYF NAQKPPMQSS GIKHAGVKEG KAIFNQGVTN EQIPACMECH GSAGQGAGPF 
PRLAGQRYGY IIQQLTYFHN GTRVNTLMNQ IAKNITVAQM KDVAAYLSSL