Gene AFE_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3141 
Symbol 
ID7135468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2824988 
End bp2825428 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content53% 
IMG OID643531492 
ProductRrf2 family protein 
Protein accessionYP_002427503 
Protein GI218667768 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.200372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTGA GCAAAGCTAG CGAATATGCC CTGCGGAGTC TAATTTATCT GGCCGCTCAG 
CCATCGGGAA GGCCGGTGCT GAGCCGGGAT ATTTCTGACT ATATAGGGGG CTCCGCGCCA 
TGCGTTACCA AAGTATTGCG CTGCTTGGCC AAGCGTGGAA TCCTGTATTC CGTAAAAGGG 
AAGGGCGGTG GCTATATGTT GCGCCCTGGT GCCGAGTCCC TAAATATTAT TGACGTCATT 
GAGATTACCG AAGGGCGTCC GCTAGAGATA CGCTGCATAC TGGGCCATGA CTGCGTTAGA 
AATACTACGC TTTGTCCTCT ACATCCACAA TGGGAGGCCA TCAAAAGCCG TGAAATGGGC 
TTTCTAAGGG GGCAAACTGT TGGCGCGATA TCGCGGGCAA TGTTTTGGGT TGATGCGGTG 
ACCGCTGCCG TGCAGTGTTA G
 
Protein sequence
MMLSKASEYA LRSLIYLAAQ PSGRPVLSRD ISDYIGGSAP CVTKVLRCLA KRGILYSVKG 
KGGGYMLRPG AESLNIIDVI EITEGRPLEI RCILGHDCVR NTTLCPLHPQ WEAIKSREMG 
FLRGQTVGAI SRAMFWVDAV TAAVQC