Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3136 |
Symbol | |
ID | 7135581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2821701 |
End bp | 2822954 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643531487 |
Product | sensor histidine kinase |
Protein accession | YP_002427498 |
Protein GI | 218666345 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0506729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCATG GCGCCTTGAA CCTCCAGCGC GTTTTGCTGC TACGCGGAAT GGCTGTCATC GGCCAATGCA TGGCCATAGC CGTGGTTACG ATCATTCTCA AATGGCACAT ACCCATATGG CATTTGGCGG CGGTAGTCGC CATAGAAATA CTCCTGACAA TGGCCACCAC TGTTCGCCTT ACTTTCCAGT GGCCTATCAG CAACCATGAG TTCTTTGCGC AGATCCTGGC CGATGTTGCC ATTCTGGTGG CCCTCCTATA TTTTTCCGGG GGCCCTACCA ATCCATTTAT CGCCTTACTG TTGTTACCAT TAGTTATTAC CGTTGCCACC CTTCCAAAAA TATACGGGTG GTCAATGGCG GCGATAACCG TATTGTGCTA TTCAGGATTG ATGGCTTCTT ATGTACCGCT ACCACTACAT GCTCTTGCCA CATACGAAAT GAAGTTGCAC ATATGGGGGA TGTGGTTTGA ATTTATTATA ATTGCCGGCG CTATCAGCTA TTTCGTCAAA CGCATGAGCG ACAGCCTGCA GGAACGGGAT CAGGCTATCG CCCATGCGCG CGAAGAAAAA CTGATGATGG ATCGCGTTGT TGACCTAGGT GCTTTGGCGG CCGGTGTTGC TCATGAGCTG GGGACGCCTC TCGCCACTAT GACGATAATA ACCAAGGACC TGCAGCAGGA CTATAAAGAA ACCCAGAATC TTTCGGAAAG TCTGGGTATT TTGTATGAAC AGCTGCAGCG GTGTAAACGC ATTCTCAGCA CAATGTCTGC TTCCGCTGGC CAGTTGCAGG CATCGAGCGG TTGCCAGCTA CGCATCGAAG AATACCTCAA TGATATCATT ACCAAATGGG GCGATGCTCG TCCGGGTATT CACGTCGAAT TTCGTTCAGA TGGCTCCGGA TCGACTGCAA AAATTGTTGC GGAGCATACC TTGACTCAGG CGCTAACCAA CATTTTCAAT AACGCCGCCG ACGAATCGCC TGATTATGTA GAAATAGATG TACACTGTAG CGATCACGAT GTCGTCATTG ATGTCTGCGA TCTTGGTCGC GGGGTCACTC CGGAGATAGC CAGGGATGTG GGACAACCTT TTGTCTCTAA AAAAGAAGAT GGTCTTGGTC TTGGGCTTTT TTTAGCGACT ACCATTATAA ACCGTTTGGG TGGGAGCGTC TCCCTGTTCA GCCGGAGAGA GGGAGGATCC TGTACCCGTG TGGTATTTCC CCTGACCTCA TTACTGATAA GTACCAACAA CTAA
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Protein sequence | MSHGALNLQR VLLLRGMAVI GQCMAIAVVT IILKWHIPIW HLAAVVAIEI LLTMATTVRL TFQWPISNHE FFAQILADVA ILVALLYFSG GPTNPFIALL LLPLVITVAT LPKIYGWSMA AITVLCYSGL MASYVPLPLH ALATYEMKLH IWGMWFEFII IAGAISYFVK RMSDSLQERD QAIAHAREEK LMMDRVVDLG ALAAGVAHEL GTPLATMTII TKDLQQDYKE TQNLSESLGI LYEQLQRCKR ILSTMSASAG QLQASSGCQL RIEEYLNDII TKWGDARPGI HVEFRSDGSG STAKIVAEHT LTQALTNIFN NAADESPDYV EIDVHCSDHD VVIDVCDLGR GVTPEIARDV GQPFVSKKED GLGLGLFLAT TIINRLGGSV SLFSRREGGS CTRVVFPLTS LLISTNN
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