Gene AFE_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3136 
Symbol 
ID7135581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2821701 
End bp2822954 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content50% 
IMG OID643531487 
Productsensor histidine kinase 
Protein accessionYP_002427498 
Protein GI218666345 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0506729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATG GCGCCTTGAA CCTCCAGCGC GTTTTGCTGC TACGCGGAAT GGCTGTCATC 
GGCCAATGCA TGGCCATAGC CGTGGTTACG ATCATTCTCA AATGGCACAT ACCCATATGG
CATTTGGCGG CGGTAGTCGC CATAGAAATA CTCCTGACAA TGGCCACCAC TGTTCGCCTT
ACTTTCCAGT GGCCTATCAG CAACCATGAG TTCTTTGCGC AGATCCTGGC CGATGTTGCC
ATTCTGGTGG CCCTCCTATA TTTTTCCGGG GGCCCTACCA ATCCATTTAT CGCCTTACTG
TTGTTACCAT TAGTTATTAC CGTTGCCACC CTTCCAAAAA TATACGGGTG GTCAATGGCG
GCGATAACCG TATTGTGCTA TTCAGGATTG ATGGCTTCTT ATGTACCGCT ACCACTACAT
GCTCTTGCCA CATACGAAAT GAAGTTGCAC ATATGGGGGA TGTGGTTTGA ATTTATTATA
ATTGCCGGCG CTATCAGCTA TTTCGTCAAA CGCATGAGCG ACAGCCTGCA GGAACGGGAT
CAGGCTATCG CCCATGCGCG CGAAGAAAAA CTGATGATGG ATCGCGTTGT TGACCTAGGT
GCTTTGGCGG CCGGTGTTGC TCATGAGCTG GGGACGCCTC TCGCCACTAT GACGATAATA
ACCAAGGACC TGCAGCAGGA CTATAAAGAA ACCCAGAATC TTTCGGAAAG TCTGGGTATT
TTGTATGAAC AGCTGCAGCG GTGTAAACGC ATTCTCAGCA CAATGTCTGC TTCCGCTGGC
CAGTTGCAGG CATCGAGCGG TTGCCAGCTA CGCATCGAAG AATACCTCAA TGATATCATT
ACCAAATGGG GCGATGCTCG TCCGGGTATT CACGTCGAAT TTCGTTCAGA TGGCTCCGGA
TCGACTGCAA AAATTGTTGC GGAGCATACC TTGACTCAGG CGCTAACCAA CATTTTCAAT
AACGCCGCCG ACGAATCGCC TGATTATGTA GAAATAGATG TACACTGTAG CGATCACGAT
GTCGTCATTG ATGTCTGCGA TCTTGGTCGC GGGGTCACTC CGGAGATAGC CAGGGATGTG
GGACAACCTT TTGTCTCTAA AAAAGAAGAT GGTCTTGGTC TTGGGCTTTT TTTAGCGACT
ACCATTATAA ACCGTTTGGG TGGGAGCGTC TCCCTGTTCA GCCGGAGAGA GGGAGGATCC
TGTACCCGTG TGGTATTTCC CCTGACCTCA TTACTGATAA GTACCAACAA CTAA
 
Protein sequence
MSHGALNLQR VLLLRGMAVI GQCMAIAVVT IILKWHIPIW HLAAVVAIEI LLTMATTVRL 
TFQWPISNHE FFAQILADVA ILVALLYFSG GPTNPFIALL LLPLVITVAT LPKIYGWSMA
AITVLCYSGL MASYVPLPLH ALATYEMKLH IWGMWFEFII IAGAISYFVK RMSDSLQERD
QAIAHAREEK LMMDRVVDLG ALAAGVAHEL GTPLATMTII TKDLQQDYKE TQNLSESLGI
LYEQLQRCKR ILSTMSASAG QLQASSGCQL RIEEYLNDII TKWGDARPGI HVEFRSDGSG
STAKIVAEHT LTQALTNIFN NAADESPDYV EIDVHCSDHD VVIDVCDLGR GVTPEIARDV
GQPFVSKKED GLGLGLFLAT TIINRLGGSV SLFSRREGGS CTRVVFPLTS LLISTNN