| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3111 |
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| Symbol | petC-1 |
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| ID | 7136609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2796119 |
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| End bp | 2796847 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643531462 |
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| Product | ubiquinol--cytochrome c reductase, cytochrome c1 subunit |
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| Protein accession | YP_002427473 |
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| Protein GI | 218665234 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACGT ACAGATATCT ATGGTTTTTG TTGGTGTCCA TGTTGATTCC CGGGATAGCA
TGGGGAGCGG AAAATACGGT ACACTGGATG ACGCCGCATT ATACGTTCAA CCGGACCACT
GTAATAGCTG GAGCGCGTTA TTTTGCAGAT CACTGTATGG CGTGTCATTC AGTTAGTTCG
TTGCGTTACG AGTACCTCCG TGCAGATCTT GGCATGACGA AAAAAGAGGT GGAGAAGGAC
ATCATGCTTC CGAACGGTGC GGCCTGGAAG GGACAAATAG TCTCCCCAAT GCCCCCTGAC
ATGGCAGCCA AATGGTTAGG CAAGCCTCCT CCAAACTTGA GTCATATGGA CCGGTATCTT
GGCTCAAAAT TTATTTATAC GTACCTGCTG TCATTCTATT GGGATCCTGC GCGACCATCA
GGTTGGAATA ATTATGTGTT CCCAATGGTT GCCATGCCAA ATATATTGGC TCCATGGGGC
GGTACGGTTG GGTCAAAGGG GCAAGTAATT TTTCCCGGAA GACTTTCTCC TGCCAAGTAT
CACCAAAATG TTGCAGATGT CGTGGCGTTC CTTCGGTACG CCTCGGATCC TTCGTATTTT
ACAAGAATGG CTATCGGCCC ATATGTCATT GGCATAATGG TACTATTCAC CATTCTTGCT
TATTTTCTCA AGACAGCATA TTGGATTGAT CTGAAGAAAA AACGTAGTAA TACCCATACA
AAGGGCTAG
|
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| Protein sequence | MSTYRYLWFL LVSMLIPGIA WGAENTVHWM TPHYTFNRTT VIAGARYFAD HCMACHSVSS
LRYEYLRADL GMTKKEVEKD IMLPNGAAWK GQIVSPMPPD MAAKWLGKPP PNLSHMDRYL
GSKFIYTYLL SFYWDPARPS GWNNYVFPMV AMPNILAPWG GTVGSKGQVI FPGRLSPAKY
HQNVADVVAF LRYASDPSYF TRMAIGPYVI GIMVLFTILA YFLKTAYWID LKKKRSNTHT
KG
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