Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3110 |
Symbol | petB-1 |
ID | 7134470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2794914 |
End bp | 2796122 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643531461 |
Product | ubiquinol--cytochrome c reductase, cytochrome b subunit |
Protein accession | YP_002427472 |
Protein GI | 218666252 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.176083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAT TTTCGGCATG GGTTAACAAG AGGCTCCCGG TAGATGAGAC CATAAGGGAG CACATGACAG AATATTTTGC GCCAAGAAAC TTCAATATTC TATACTATGC AGGATCATTG CTGTTGTTGA TGATCGTGCT CCAGCTGATT AGCGGGTTTT TTCTGATGGC GCATTATGTT CCTACATCTC AAGATGCCTT TGCTTCAGTG CAAGGCATCA TGTACGACAC AAAATGGGGC TGGTTGATAC GCTATATGCA TGTTGATGGC GTATCTTTAA TATTTATCTT ACTCTATACC CATATGTTTC GCGGGCTACT GTATGGCTCG CATCGTGCCC CTAGGGAGCT TGTTTGGGTT ATCGGGTATG TTATTTATTT GTTAATGATG GCGGAAGCCT TTGTCGGCTA TGTATTGCCA TTTGGAAATT TATCTTATTG GGCTGGCGAG GTTATTACCT CCATCATGCA CGCACTGCCG GTGGTTGGGC CATCTCTTAC TACCCTGACG CGCGGCGGGC CCGGGATTGG GTCTGCGACA CTGCAACGCT TTCTAGCGCT GCACGTGGTT CTGTTCTTCC TTATTATTCT CGCAGCCATC GCGCTCCATA TCGTAGCATT GCATCGGGTA GGTTCGAACA ACCCCGACGG TATTGACATC AAAAAACACA AGGGCCCGGA TGGAAAACCG TTAGATGGTG TACCATTTCA CCCATATTAT ACCGTGAAAG ACCTGTTTGG TGTTGGGGTT TGGCTGACCA TATTTGTTTC TGTTATATTT TATGCTCCAA CCATGCATGG GGTATTCATG GAACGTACGA CGTTCCTTGC CGCAAACCCG ATGGTCAGTT TACCAGATGT AACCCCACCT TGGTACCTAT CGCCTTATTA CGCAATGCTC CGTGCGGTAC CTAACAAGTA TTACGGAATC GCAATAATGA TTACATCCGT CTTGCTGCCG TTGCTGTTGC CTTGGCTCGA TCGTAACCCG GTTCGGTCCA GCAGATACCG TCCAGTGTAC AGGATAATGC TTATTGTTGC GGGGGTTTCC TTCATTATTT TGGCATGGAT TGGTCAGGAA CCACCGTTGC CTAAATATTT CTTGATCGAG CGGGTGGCGA CAGCTTTATA CCTCGGGTTT TACCTCTTGC TGCCGTTCGT TAGCATGATA GAACCTACAC GGCCCGTACC GGAGAGGGTT ACAGGATGA
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Protein sequence | MSRFSAWVNK RLPVDETIRE HMTEYFAPRN FNILYYAGSL LLLMIVLQLI SGFFLMAHYV PTSQDAFASV QGIMYDTKWG WLIRYMHVDG VSLIFILLYT HMFRGLLYGS HRAPRELVWV IGYVIYLLMM AEAFVGYVLP FGNLSYWAGE VITSIMHALP VVGPSLTTLT RGGPGIGSAT LQRFLALHVV LFFLIILAAI ALHIVALHRV GSNNPDGIDI KKHKGPDGKP LDGVPFHPYY TVKDLFGVGV WLTIFVSVIF YAPTMHGVFM ERTTFLAANP MVSLPDVTPP WYLSPYYAML RAVPNKYYGI AIMITSVLLP LLLPWLDRNP VRSSRYRPVY RIMLIVAGVS FIILAWIGQE PPLPKYFLIE RVATALYLGF YLLLPFVSMI EPTRPVPERV TG
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