| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3109 |
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| Symbol | petA-1 |
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| ID | 7136206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2794266 |
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| End bp | 2794886 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643531460 |
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| Product | ubiquinol--cytochrome c reductase, iron-sulfur subunit |
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| Protein accession | YP_002427471 |
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| Protein GI | 218667795 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0161423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACAG TTACAGATTC GGAACATGGC CACAAAAATA TTACACGCCG GCGATTTTTG
GCGGCGGCTA CATCCGCAGT TGGCGCGGTG GTGGCCGGAA TGGTTGCGGT GCCGCTCGTC
GATTCATTGG AGCCAACGGC AGCGGCCGAA GCAGCATCGT CAACCACCGT AGATCTGACG
CCCATTGAAC CAGGTATGCA GGTAACGGTG CCGTGGCAGA AGAAACCGGT AATAATAATA
AATCGGACCC CGGAAATGTT GGCTACATTA AAAGAAACGA TGGCAAAAGG GATTTTGAAA
GATCCGCTAT GCAAAGTGCC GCAGCAGCCT CCATACTGTA CAAACATGTA TCGTTCCAGA
GTTCCTGAAT GGTATGTCGG GATACGTATC TGTAATCATC TATGCTGTAT TCCACATTAT
AGACCGAAGA AAGGAAGTGT TGCACCATGG TGGCTTGGCG GATTTCACTG CCCGTGCCAT
GGTTCAATGT ACGATCTGTC TGCACGGGTG ATACAGGGTT CCCCAGCCCC GCATAATATG
GCGGTGCCGG AGTATGAGCT CTCCACAGAG AAGATGAGTG CTACGATAAC TCATATGTAT
CCCAAAGCTC ACTTGTGTTG A
|
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| Protein sequence | MTTVTDSEHG HKNITRRRFL AAATSAVGAV VAGMVAVPLV DSLEPTAAAE AASSTTVDLT
PIEPGMQVTV PWQKKPVIII NRTPEMLATL KETMAKGILK DPLCKVPQQP PYCTNMYRSR
VPEWYVGIRI CNHLCCIPHY RPKKGSVAPW WLGGFHCPCH GSMYDLSARV IQGSPAPHNM
AVPEYELSTE KMSATITHMY PKAHLC
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